RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 RPS14P62263 151 aaKnown RBP9.31□□□□□ -0.92
TRIM55-201ENST00000276573 LIPEQ05469 1076 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 PWP1Q13610 501 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 AGERQ15109 404 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 WSCD2Q2TBF2 565 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 XKR6Q5GH73 641 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 AGBL4Q5VU57 503 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 ANO7Q6IWH7 933 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 C11orf96Q7Z7L8 435 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 TMEM102Q8N9M5 508 aaPredicted RBP9.31□□□□□ -0.92
TRIM55-201ENST00000276573 OR2T34Q8NGX1 318 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 OR2T3Q8NH03 318 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 HM13Q8TCT9 377 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 EZH1Q92800 747 aaPredicted RBP9.31□□□□□ -0.92
TRIM55-201ENST00000276573 SLCO4A1Q96BD0 722 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 MED8Q96G25 268 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 TRIM8Q9BZR9 551 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 DPEP2Q9H4A9 486 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 ACTR3BQ9P1U1 418 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 CIDEBQ9UHD4 219 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 C15orf38-AP3S2A0A0A6YYH1 394 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 AQP12BA6NM10 295 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 E7EQ34 232 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 IL6P05231 212 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 PCSK2P16519 638 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 AMD1P17707 334 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 ATP6V1B2P21281 511 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 ACADLP28330 430 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 HNF4AP41235 474 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 NFE2L1Q14494 772 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 IRAK1BP1Q5VVH5 260 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 LCN8Q6JVE9 175 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 CRTC3Q6UUV7 619 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 MTSS1LQ765P7 747 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 TRMT11Q7Z4G4 463 aaKnown RBP9.3□□□□□ -0.92
TRIM55-201ENST00000276573 ARPINQ7Z6K5 226 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 PTRH1Q86Y79 214 aaKnown RBP9.3□□□□□ -0.92
TRIM55-201ENST00000276573 AQP12AQ8IXF9 295 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 KRTCAP2Q8N6L1 136 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 OR9A1PQ8NGU1 263 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 WDR20Q8TBZ3 569 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 ZNF480Q8WV37 535 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 APIPQ96GX9 242 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 TMEM74Q96NL1 305 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 CGREF1Q99674 301 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 ZDHHC5Q9C0B5 715 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 MUC13Q9H3R2 512 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 CLMPQ9H6B4 373 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 SERGEFQ9UGK8 458 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 EGFL7Q9UHF1 273 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 DLGAP4Q9Y2H0 992 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 TMED5Q9Y3A6 229 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 PCYT1BQ9Y5K3 369 aaPredicted RBP9.3□□□□□ -0.92
TRIM55-201ENST00000276573 DNMT3AQ9Y6K1 912 aaPredicted RBP9.3□□□□□ -0.92
TRIM55-201ENST00000276573 ZFC3H1O60293 1989 aaKnown RBP9.3□□□□□ -0.92
TRIM55-201ENST00000276573 H0YIV9 168 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 PCCBP05166 539 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 MAPK1P28482 360 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 HTR1EP28566 365 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 GRIA3P42263 894 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 SEC13P55735 322 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 CDK3Q00526 305 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 CSTF3Q12996 717 aaKnown RBP9.3□□□□□ -0.92
TRIM55-201ENST00000276573 GRAMD1BQ3KR37 738 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 PLA2G4EQ3MJ16 856 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 FAM174BQ3ZCQ3 159 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 SPANXN4Q5MJ08 99 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 ZNF776Q68DI1 518 aaPredicted RBP9.3□□□□□ -0.92
TRIM55-201ENST00000276573 GRHL2Q6ISB3 625 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 IRGCQ6NXR0 463 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 FAM83HQ6ZRV2 1179 aaPredicted RBP9.3□□□□□ -0.92
TRIM55-201ENST00000276573 EP400NLQ6ZTU2 488 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 IFNEQ86WN2 208 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 HEATR4Q86WZ0 1026 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 CACUL1Q86Y37 369 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 TICAM1Q8IUC6 712 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 SPPL2CQ8IUH8 684 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 FAM9CQ8IZT9 166 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 RNF175Q8N4F7 328 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 GOLM1Q8NBJ4 401 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 ADCY4Q8NFM4 1077 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 CSGALNACT1Q8TDX6 532 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 CANT1Q8WVQ1 401 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 SLC13A3Q8WWT9 602 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 GTF2H4Q92759 462 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 FCRL1Q96LA6 429 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 PPM1MQ96MI6 270 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 KCTD14Q9BQ13 255 aaPredicted RBP9.3□□□□□ -0.92
TRIM55-201ENST00000276573 LGR4Q9BXB1 951 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 TRIM15Q9C019 465 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 OR52A5Q9H2C5 316 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 ALG2Q9H553 416 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 MBNL1Q9NR56 388 aaKnown RBP9.3□□□□□ -0.92
TRIM55-201ENST00000276573 GPRC5BQ9NZH0 403 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 SLC23A2Q9UGH3 650 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 PRKAB1Q9Y478 270 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 DTNAQ9Y4J8 743 aa9.3□□□□□ -0.92
TRIM55-201ENST00000276573 A0A1W2PP55 124 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 KCNH1O95259 989 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 PGRP06401 933 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms