RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 DBF4BQ8NFT6 615 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 LGALS12Q96DT0 336 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 MRGPRX2Q96LB1 330 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 MYOCQ99972 504 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 TTYH2Q9BSA4 534 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 CORO2BQ9UQ03 480 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 LAMB1P07942 1786 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 I3L521 148 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 SLC28A2O43868 658 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 DFNA5O60443 496 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 MT-ND2P03891 347 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 JUNP05412 331 aaKnown RBP11.3□□□□□ -0.6
VPS33A-201ENST00000267199 CD97P48960 835 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 DNAJB13P59910 316 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 CHIT1Q13231 466 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 PTGR1Q14914 329 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 GPAT3Q53EU6 434 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 SMYD5Q6GMV2 418 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 ANKRD13BQ86YJ7 626 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 OR10G2Q8NGC3 310 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 TEX47Q8TBZ9 253 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 XAGE5Q8WWM1 108 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 SGK2Q9HBY8 427 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 CFAP97Q9P2B7 532 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 LTBP3Q9NS15 1303 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 TCRBV5S1A1TA0A578 114 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 SLC38A8A6NNN8 435 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 SLC30A4O14863 429 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 SGTAO43765 313 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 HAPLN1P10915 354 aaPredicted RBP11.3□□□□□ -0.6
VPS33A-201ENST00000267199 TCEA1P23193 301 aaKnown RBP11.3□□□□□ -0.6
VPS33A-201ENST00000267199 MAGEA6P43360 314 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 CLCN2P51788 898 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 NAE1Q13564 534 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 SUZ12Q15022 739 aaKnown RBP11.3□□□□□ -0.6
VPS33A-201ENST00000267199 TBRG1Q3YBR2 411 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 OR4F3Q6IEY1 312 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.3□□□□□ -0.6
VPS33A-201ENST00000267199 GHDCQ8N2G8 530 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 C2orf73Q8N5S3 287 aaPredicted RBP11.3□□□□□ -0.6
VPS33A-201ENST00000267199 IPCEF1Q8WWN9 437 aaPredicted RBP11.3□□□□□ -0.6
VPS33A-201ENST00000267199 ZNF641Q96N77 438 aaPredicted RBP11.3□□□□□ -0.6
VPS33A-201ENST00000267199 TRIT1Q9H3H1 467 aaKnown RBP11.3□□□□□ -0.6
VPS33A-201ENST00000267199 MTMR10Q9NXD2 777 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 TVP23BQ9NYZ1 205 aa11.3□□□□□ -0.6
VPS33A-201ENST00000267199 IFNW1P05000 195 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 PPIBP23284 216 aaKnown RBP11.29□□□□□ -0.6
VPS33A-201ENST00000267199 MYF6P23409 242 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 STC1P52823 247 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 NDUFAF6Q330K2 333 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 ASB18Q6ZVZ8 466 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 CLDN19Q8N6F1 224 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 ASCC1Q8N9N2 400 aaKnown RBP11.29□□□□□ -0.6
VPS33A-201ENST00000267199 POP5Q969H6 163 aaKnown RBP11.29□□□□□ -0.6
VPS33A-201ENST00000267199 YIPF2Q9BWQ6 316 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 ZIM2Q9NZV7 527 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 KIAA1522Q9P206 1035 aaPredicted RBP11.29□□□□□ -0.6
VPS33A-201ENST00000267199 ZNF451Q9Y4E5 1061 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 CHRNA1P02708 482 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 CD68P34810 354 aaPredicted RBP11.29□□□□□ -0.6
VPS33A-201ENST00000267199 FOXM1Q08050 763 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 SCAPQ12770 1279 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 TAZQ16635 292 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 TMPRSS11BQ86T26 416 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 OR4F6Q8NGB9 312 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 EEF1AKMT1Q8WVE0 214 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 SYT17Q9BSW7 474 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 NPLQ9BXD5 320 aaPredicted RBP11.29□□□□□ -0.6
VPS33A-201ENST00000267199 TMEM39AQ9NV64 488 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 PAQR5Q9NXK6 330 aaPredicted RBP11.29□□□□□ -0.6
VPS33A-201ENST00000267199 SEC14L3Q9UDX4 400 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 CLIC1O00299 241 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 PTGESO14684 152 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 GPR32O75388 356 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 OR5F1O95221 314 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 OXTRP30559 389 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 DNAJA1P31689 397 aaKnown RBP11.29□□□□□ -0.6
VPS33A-201ENST00000267199 PTGS2P35354 604 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 GRIA2P42262 883 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 ANXA8L1Q5VT79 327 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 PGM2L1Q6PCE3 622 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 AGMOQ6ZNB7 445 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 METTL3Q86U44 580 aaKnown RBP11.29□□□□□ -0.6
VPS33A-201ENST00000267199 LGI4Q8N135 537 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 METTL25Q8N6Q8 603 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 GLB1L3Q8NCI6 653 aaPredicted RBP11.29□□□□□ -0.6
VPS33A-201ENST00000267199 KIAA1191Q96A73 305 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 SEZ6LQ9BYH1 1024 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 SLC22A4Q9H015 551 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 KLHL31Q9H511 634 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 SEMA3GQ9NS98 782 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 MIOSQ9NXC5 875 aa11.29□□□□□ -0.6
VPS33A-201ENST00000267199 SPIN1Q9Y657 262 aaPredicted RBP11.29□□□□□ -0.6
VPS33A-201ENST00000267199 LCHNA4D1U4 455 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 OR2AG2A6NM03 316 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 M0QX08 132 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 ORC5O43913 435 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 MAFKO60675 156 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 BCAS1O75363 584 aaPredicted RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 UGT2B17O75795 530 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms