RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 FAM60AQ9NP50 221 aa7□□□□□ -1.29
DEPDC1B-201ENST00000265036 SIDT1Q9NXL6 827 aaKnown RBP7□□□□□ -1.29
DEPDC1B-201ENST00000265036 ARL15Q9NXU5 204 aa7□□□□□ -1.29
DEPDC1B-201ENST00000265036 OR6C2Q9NZP2 312 aa7□□□□□ -1.29
DEPDC1B-201ENST00000265036 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7□□□□□ -1.29
DEPDC1B-201ENST00000265036 TBK1Q9UHD2 729 aa7□□□□□ -1.29
DEPDC1B-201ENST00000265036 LNPEPQ9UIQ6 1025 aa7□□□□□ -1.29
DEPDC1B-201ENST00000265036 ZMIZ1Q9ULJ6 1067 aa7□□□□□ -1.29
DEPDC1B-201ENST00000265036 SH2B3Q9UQQ2 575 aa7□□□□□ -1.29
DEPDC1B-201ENST00000265036 POLR1CO15160 346 aaPredicted RBP6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 SHBGP04278 402 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 GSTA2P09210 222 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 SLC35E2BP0CK96 405 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 ZNF28P17035 718 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 NELFEP18615 380 aaKnown RBP6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 IMPA1P29218 277 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 ATP5DP30049 168 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 SKIV2L2P42285 1042 aaKnown RBP6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 RAB10P61026 200 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 DLG1Q12959 904 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 CBLBQ13191 982 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 EIF3IQ13347 325 aaKnown RBP6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 SQSTM1Q13501 440 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 RTP5Q14D33 572 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 ST3GAL2Q16842 350 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 TBC1D25Q3MII6 688 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 KIAA1614Q5VZ46 1190 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 SBSNQ6UWP8 590 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 PRSS42Q7Z5A4 293 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 ADCK2Q7Z695 626 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 VASH2Q86V25 355 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 PROSER1Q86XN7 944 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 PLD3Q8IV08 490 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 OR2W6PQ8NHA6 318 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 KCTD4Q8WVF5 259 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 CRELD1Q96HD1 420 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 FAM129AQ9BZQ8 928 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 SNX15Q9NRS6 342 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 THSD1Q9NS62 852 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 FGF21Q9NSA1 209 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 IRAK4Q9NWZ3 460 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 PDP2Q9P2J9 529 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 EPHA6Q9UF33 1036 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 CORO1CQ9ULV4 474 aaPredicted RBP6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 IKBKGQ9Y6K9 419 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 SCN2AQ99250 2005 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 CNTRLQ7Z7A1 2325 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 A0A087WUV0 522 aaPredicted RBP6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 A0A1W2PPV9 198 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 TMEM150CB9EJG8 249 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 MYO1CO00159 1063 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 ZBTB11O95625 1053 aaPredicted RBP6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 ALDOAP04075 364 aaKnown RBP6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 NTRK1P04629 796 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 MPC1LP0DKB6 136 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 CBSLP0DN79 551 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 CYP2A7P20853 494 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 ITPKBP27987 946 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 CBSP35520 551 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 CCNFP41002 786 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 EIF2S3P41091 472 aaKnown RBP6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 PNLIPRP1P54315 467 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 POU4F1Q01851 419 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 TRA2AQ13595 282 aaKnown RBP eCLIP6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 ZXDCQ2QGD7 858 aaPredicted RBP6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 GRTP1Q5TC63 336 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 FRA10AC1Q70Z53 315 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 RELL1Q8IUW5 271 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 RASGRP3Q8IV61 690 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 C19orf47Q8N9M1 422 aaKnown RBP6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 OR2L8Q8NGY9 312 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 ZFPM2Q8WW38 1151 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 SLC44A1Q8WWI5 657 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 ESAMQ96AP7 390 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 PTERQ96BW5 349 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 TRAPPC9Q96Q05 1148 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 EGFL8Q99944 293 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 TSPYL1Q9H0U9 437 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 VPS11Q9H270 941 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 ALG9Q9H6U8 611 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 ZNF358Q9NW07 568 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 CUEDC1Q9NWM3 386 aaPredicted RBP6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 STOX2Q9P2F5 926 aaPredicted RBP6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 PCDHGA8Q9Y5G5 932 aa6.99□□□□□ -1.29
DEPDC1B-201ENST00000265036 A0A0J9YY10 115 aa6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 PABPN1LA6NDY0 278 aaKnown RBP6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 CDRT15L2A8MXV6 281 aa6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 TRIM49D1C9J1S8 452 aa6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 E7ENX8 843 aa6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 TMX2-CTNND1H3BSU7 103 aa6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 GFYI3L273 518 aa6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 GOLGA8RI6L899 631 aa6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 KDM1AO60341 852 aa6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 KIAA0754O94854 1291 aa6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 ANKRD34CP0C6C1 535 aa6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 GCAP28676 217 aa6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 MSH2P43246 934 aa6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 HSD11B2P80365 405 aa6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 TAP2Q03519 686 aa6.98□□□□□ -1.29
DEPDC1B-201ENST00000265036 NAE1Q13564 534 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms