RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 E5RI56 91 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 K7EM74 188 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 ZSCAN9O15535 394 aaPredicted RBP15.45■□□□□ 0.06
USE1-201ENST00000263897 WISP1O95388 367 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 ZIC2O95409 532 aaPredicted RBP15.45■□□□□ 0.06
USE1-201ENST00000263897 GRIA3P42263 894 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 CLCN7P51798 805 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 DCDP81605 110 aaKnown RBP15.45■□□□□ 0.06
USE1-201ENST00000263897 NCF4Q15080 339 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 LONRF1Q17RB8 773 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 KLHL38Q2WGJ6 581 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 ACSBG2Q5FVE4 666 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 ZC3H12BQ5HYM0 836 aaKnown RBP15.45■□□□□ 0.06
USE1-201ENST00000263897 FAM69BQ5VUD6 431 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 PROKR1Q8TCW9 393 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 CALML6Q8TD86 181 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 DENND1AQ8TEH3 1009 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 SLCO2A1Q92959 643 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 GBP5Q96PP8 586 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 C17orf62Q9BQA9 187 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 DHRS4Q9BTZ2 278 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 TRIM55Q9BYV6 548 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 DDX47Q9H0S4 455 aaKnown RBP15.45■□□□□ 0.06
USE1-201ENST00000263897 FBXO6Q9NRD1 293 aaPredicted RBP15.45■□□□□ 0.06
USE1-201ENST00000263897 C20orf96Q9NUD7 363 aaPredicted RBP15.45■□□□□ 0.06
USE1-201ENST00000263897 KLHL42Q9P2K6 505 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 DHCR7Q9UBM7 475 aaKnown RBP15.45■□□□□ 0.06
USE1-201ENST00000263897 PCYOX1Q9UHG3 505 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 SRPK3Q9UPE1 567 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 KRT87PA6NCN2 255 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 ARGFXA6NJG6 315 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 USP27XA6NNY8 438 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 PSIP1O75475 530 aaKnown RBP15.44■□□□□ 0.06
USE1-201ENST00000263897 KLF7O75840 302 aaPredicted RBP15.44■□□□□ 0.06
USE1-201ENST00000263897 DNAJB5O75953 348 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 F7P08709 466 aaPredicted RBP15.44■□□□□ 0.06
USE1-201ENST00000263897 CD63P08962 238 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 CASRP41180 1078 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 PTGIRP43119 386 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 GCGRP47871 477 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 KCNC4Q03721 635 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 PTK6Q13882 451 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 CYP2A13Q16696 494 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 C1orf189Q5VU69 101 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 MLIPQ5VWP3 458 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 PAPD7Q5XG87 772 aaKnown RBP15.44■□□□□ 0.06
USE1-201ENST00000263897 ZNF549Q6P9A3 640 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 PCGF5Q86SE9 256 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 OR2A1Q8NGT9 310 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 OR9A1PQ8NGU1 263 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 ANP32BQ92688 251 aaKnown RBP15.44■□□□□ 0.06
USE1-201ENST00000263897 PDLIM2Q96JY6 352 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 SLC30A3Q99726 388 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 NDC1Q9BTX1 674 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 TRIM4Q9C037 500 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 ING2Q9H160 280 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 CCDC68Q9H2F9 335 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 TXLNGQ9NUQ3 528 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 IRAK4Q9NWZ3 460 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 SPATA7Q9P0W8 599 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 ASIC3Q9UHC3 531 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 TSR3Q9UJK0 312 aaKnown RBP15.44■□□□□ 0.06
USE1-201ENST00000263897 FBXO5Q9UKT4 447 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 MED16Q9Y2X0 877 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 KLK4Q9Y5K2 254 aa15.44■□□□□ 0.06
USE1-201ENST00000263897 A0A1W2PPV9 198 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 ARHGEF33A8MVX0 844 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 DNALI1O14645 258 aaPredicted RBP15.43■□□□□ 0.06
USE1-201ENST00000263897 HAUS5O94927 633 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 NR1D1P20393 614 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 IVDP26440 423 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 PSMB5P28074 263 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 SLC1A2P43004 574 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 CSRP3P50461 194 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 CCL11P51671 97 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 ARSFP54793 590 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 TTLL9Q3SXZ7 439 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 NKAIN1Q4KMZ8 207 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 HSP90AA5PQ58FG0 334 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 ASB18Q6ZVZ8 466 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 NEK10Q6ZWH5 1172 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.43■□□□□ 0.06
USE1-201ENST00000263897 OR2L3Q8NG85 312 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 KCNJ9Q92806 393 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 ZNF285Q96NJ3 590 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 MIPEPQ99797 713 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 ACSS2Q9NR19 701 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 ENAMQ9NRM1 1142 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 GPN3Q9UHW5 284 aaPredicted RBP15.43■□□□□ 0.06
USE1-201ENST00000263897 PADI2Q9Y2J8 665 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 DHRS7Q9Y394 339 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 COMMD10Q9Y6G5 202 aa15.43■□□□□ 0.06
USE1-201ENST00000263897 SRPX2O60687 465 aaPredicted RBP15.42■□□□□ 0.06
USE1-201ENST00000263897 CTSVO60911 334 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 CATP04040 527 aaKnown RBP15.42■□□□□ 0.06
USE1-201ENST00000263897 ERGP11308 486 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 PGAM1P18669 254 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 ALAS2P22557 587 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 GNG11P61952 73 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 TLE1Q04724 770 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms