RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 ALDH2P05091 517 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 ENO2P09104 434 aaPredicted RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 ALPPL2P10696 532 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 BMP4P12644 408 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 DGKAP23743 735 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 CRHBPP24387 322 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 DCTP40126 519 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 ACADVLP49748 655 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 ZNF135P52742 658 aaPredicted RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 RPS26P62854 115 aaKnown RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 AQP6Q13520 282 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 VARS2Q5ST30 1063 aaKnown RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 DESI1Q6ICB0 168 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 SDE2Q6IQ49 451 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 LCN8Q6JVE9 175 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 KRT74Q7RTS7 529 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 PRRT2Q7Z6L0 340 aaPredicted RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 SCD5Q86SK9 330 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 ADGRG2Q8IZP9 1017 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 CHDHQ8NE62 594 aaPredicted RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 S100ZQ8WXG8 99 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 ZUFSPQ96AP4 578 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 YIPF4Q9BSR8 244 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 TP63Q9H3D4 680 aaPredicted RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 RAD18Q9NS91 495 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 THUMPD1Q9NXG2 353 aaKnown RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 TRPM5Q9NZQ8 1165 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 CXXC1Q9P0U4 656 aaPredicted RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 TBC1D14Q9P2M4 693 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 ABCG2Q9UNQ0 655 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 VPS9D1Q9Y2B5 631 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 DERAQ9Y315 318 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 FXYD1O00168 92 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 UMPSP11172 480 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 TACR1P25103 407 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 RPP38P78345 283 aaKnown RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 ATAD3BQ5T9A4 648 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 NEK5Q6P3R8 708 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 TMPRSS11BQ86T26 416 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 RBM23Q86U06 439 aaKnown RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 DOK4Q8TEW6 326 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 PTPN18Q99952 460 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 PAQR5Q9NXK6 330 aaPredicted RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 CD300AQ9UGN4 299 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 TNPO3Q9Y5L0 923 aaKnown RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 CLCA3PQ9Y6N3 262 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 H3BSH0 61 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 CH25HO95992 272 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 CHRNA1P02708 482 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 NUDT7P0C024 238 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 HRH2P25021 359 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 DSC3Q14574 896 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 CTU2Q2VPK5 515 aaKnown RBP9.86□□□□□ -0.83
PALB2-201ENST00000261584 ZNF284Q2VY69 593 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 USP41Q3LFD5 358 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 TRIQKQ629K1 86 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 OR2T5Q6IEZ7 315 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 GDF6Q6KF10 455 aaPredicted RBP9.86□□□□□ -0.83
PALB2-201ENST00000261584 SYCE2Q6PIF2 218 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 CELF2-AS1Q8N7Q2 184 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 OR4A15Q8NGL6 344 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 OR2T29Q8NH02 315 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 OR5K1Q8NHB7 308 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 GANCQ8TET4 914 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 KCTD13Q8WZ19 329 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 ACBD6Q9BR61 282 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 MMP28Q9H239 520 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 OSGEPL1Q9H4B0 414 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 ARMC1Q9NVT9 282 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 ADAMTS5Q9UNA0 930 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 GPR45Q9Y5Y3 372 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 LTBP4Q8N2S1 1624 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 CTDSP2O14595 271 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 MYL12BO14950 172 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 CNMDO75829 334 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 CHRNA6Q15825 494 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 CLEC12AQ5QGZ9 265 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 THOC7Q6I9Y2 204 aaKnown RBP9.86□□□□□ -0.83
PALB2-201ENST00000261584 CASP12Q6UXS9 341 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 PELI3Q8N2H9 469 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 FLCNQ8NFG4 579 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 TRUB1Q8WWH5 349 aaKnown RBP9.86□□□□□ -0.83
PALB2-201ENST00000261584 TTTY10Q9BZA0 68 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 TMEM245Q9H330 911 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 NEK6Q9HC98 313 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 ALPK2Q86TB3 2170 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 NOTOA8MTQ0 251 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 TULP3O75386 442 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 SERPINB7O75635 380 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 TGFB1P01137 390 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 ANXA4P09525 319 aaPredicted RBP9.86□□□□□ -0.83
PALB2-201ENST00000261584 PABPC1P11940 636 aaKnown RBP9.86□□□□□ -0.83
PALB2-201ENST00000261584 IL12RB1P42701 662 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 ALDH7A1P49419 539 aaKnown RBP9.86□□□□□ -0.83
PALB2-201ENST00000261584 CDK5R2Q13319 367 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 VEPH1Q14D04 833 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 ADPRMQ3LIE5 342 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 ZNF404Q494X3 552 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 CEP78Q5JTW2 689 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 VN1R5Q7Z5H4 357 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms