RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 SYT16Q17RD7 645 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 TCTE1Q5JU00 501 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 THOC7Q6I9Y2 204 aaKnown RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 TAF8Q7Z7C8 310 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 TICAM1Q8IUC6 712 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 C12orf29Q8N999 325 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 MAGEE2Q8TD90 523 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 TRPV5Q9NQA5 729 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 GLS2Q9UI32 602 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 CHKBQ9Y259 395 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 OARD1Q9Y530 152 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 CHURC1-FNTBB4DL54 471 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 TNFRSF11BO00300 401 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 DCLK1O15075 740 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 SEC24AO95486 1093 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 MYCP01106 439 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 UBTFL6P0CB48 400 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 RPS9P46781 194 aaKnown RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 LEPRP48357 1165 aaKnown RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 CD47Q08722 323 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 SLC13A2Q13183 592 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 DECR1Q16698 335 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 SLC5A9Q2M3M2 681 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 DDI2Q5TDH0 399 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 PRPF38BQ5VTL8 546 aaKnown RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 PLPP4Q5VZY2 271 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 C15orf39Q6ZRI6 1047 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF765Q7L2R6 523 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 CILP2Q8IUL8 1156 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 OR52B2Q96RD2 323 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 IER2Q9BTL4 223 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 MGAT4BQ9UQ53 548 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 POLR3HQ9Y535 204 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 TMEM14AQ9Y6G1 99 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 A0A1W2PP18 115 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 RNASEH2AO75792 299 aaKnown RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 VNN1O95497 513 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 FGFR3P22607 806 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 OMPP47874 163 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 UBXN11Q5T124 520 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 YOD1Q5VVQ6 348 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 TCEAL6Q6IPX3 200 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 C16orf46Q6P387 395 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 ZC3H14Q6PJT7 736 aaKnown RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 UFD1Q92890 307 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF578Q96N58 590 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 NDC1Q9BTX1 674 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 DUSP26Q9BV47 211 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 OR2AG1Q9H205 316 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 GRHL1Q9NZI5 618 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 TMPRSS11EQ9UL52 423 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 MKLN1Q9UL63 735 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 UBR3Q6ZT12 1888 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 TEX13CA0A0J9YWL9 993 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 TP53I11O14683 189 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 C2orf80Q0P641 193 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 CHIT1Q13231 466 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 NAE1Q13564 534 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 TDGQ13569 410 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 RAB33AQ14088 237 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 ADGRE1Q14246 886 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 SLC9B1Q4ZJI4 515 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 IL23RQ5VWK5 629 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 MBLAC2Q68D91 279 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 SLITRK4Q8IW52 837 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 HDDC3Q8N4P3 179 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF563Q8TA94 476 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 FBXO30Q8TB52 745 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 PMM1Q92871 262 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 COPS5Q92905 334 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 CPEB1Q9BZB8 566 aaKnown RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 ZFP57Q9NU63 452 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 B4GALT7Q9UBV7 327 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 NFKBIEO00221 500 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 HSMCR30P0CW71 290 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 DRD1P21728 446 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 GABARAPL2P60520 117 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 CREB5Q02930 508 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 LRRC36Q1X8D7 754 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 C5orf46Q6UWT4 87 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 ARHGAP22Q7Z5H3 698 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 ALDH16A1Q8IZ83 802 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 WDR48Q8TAF3 677 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 PTGFRNQ9P2B2 879 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 FADS3Q9Y5Q0 445 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 RAB36O95755 333 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 CCL5P13501 91 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 WEE1P30291 646 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF155Q12901 538 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 OTUD3Q5T2D3 398 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-202ENST00000261517 C22orf39Q6P5X5 142 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 ARHGAP36Q6ZRI8 547 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 CDH24Q86UP0 819 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 LAPTM4BQ86VI4 370 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 NXPE1Q8N323 547 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 COX18Q8N8Q8 333 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 OR9A1PQ8NGU1 263 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 SH3RF2Q8TEC5 729 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms