RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 CUZD1Q86UP6 607 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 TMEM139Q8IV31 216 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 DCUN1D3Q8IWE4 304 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 THNSL1Q8IYQ7 743 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 CCAR2Q8N163 923 aaKnown RBP4.06□□□□□ -1.76
CCDC54-201ENST00000261058 ZNF611Q8N823 705 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 THAP8Q8NA92 274 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 ZNF524Q96C55 264 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 SENP5Q96HI0 755 aaPredicted RBP4.06□□□□□ -1.76
CCDC54-201ENST00000261058 SPATA17Q96L03 361 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 FAM210AQ96ND0 272 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 UHRF2Q96PU4 802 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 NODALQ96S42 347 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 TRPV4Q9HBA0 871 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 CDH20Q9HBT6 801 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 SDF2L1Q9HCN8 221 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 SDR39U1Q9NRG7 319 aaPredicted RBP4.06□□□□□ -1.76
CCDC54-201ENST00000261058 ADPRHL2Q9NX46 363 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 ZNF624Q9P2J8 865 aaPredicted RBP4.06□□□□□ -1.76
CCDC54-201ENST00000261058 DAPK2Q9UIK4 370 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 ANAPC5Q9UJX4 755 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 CPSF3Q9UKF6 684 aaKnown RBP4.06□□□□□ -1.76
CCDC54-201ENST00000261058 ICAM5Q9UMF0 924 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 KNSTRNQ9Y448 316 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 IGLV9-49A0A0B4J1Y8 123 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 LOC101059948A0A1B0GTJ6 334 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 DIAPH2O60879 1101 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 PRKRAO75569 313 aaKnown RBP4.05□□□□□ -1.76
CCDC54-201ENST00000261058 SLC22A3O75751 556 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 ERVK-10P10266 1014 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 FDPSP14324 419 aaKnown RBP4.05□□□□□ -1.76
CCDC54-201ENST00000261058 STMN1P16949 149 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 GNAZP19086 355 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 CDC25CP30307 473 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 HSPA4P34932 840 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 ZNF415Q09FC8 603 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 PHLDA2Q53GA4 152 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 DCAF10Q5QP82 559 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 STPG1Q5TH74 334 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 SLC35E4Q6ICL7 350 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 C11orf63Q6NUN7 778 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 TATDN1Q6P1N9 297 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 DCLRE1AQ6PJP8 1040 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 ARHGAP22Q7Z5H3 698 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 ABI3BPQ7Z7G0 1075 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 TRPT1Q86TN4 253 aaKnown RBP4.05□□□□□ -1.76
CCDC54-201ENST00000261058 SLC4A11Q8NBS3 891 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 TM9SF4Q92544 642 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 CENPTQ96BT3 561 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 STAMBPL1Q96FJ0 436 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 OTUB1Q96FW1 271 aaPredicted RBP4.05□□□□□ -1.76
CCDC54-201ENST00000261058 HES6Q96HZ4 224 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 ZNF354BQ96LW1 612 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 ZNF558Q96NG5 402 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 PGLYRP2Q96PD5 576 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 INPP4AQ96PE3 977 aaPredicted RBP4.05□□□□□ -1.76
CCDC54-201ENST00000261058 PSD2Q9BQI7 771 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 TRAF4Q9BUZ4 470 aaPredicted RBP4.05□□□□□ -1.76
CCDC54-201ENST00000261058 DNAJC4Q9NNZ3 241 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 CHCHD3Q9NX63 227 aaKnown RBP4.05□□□□□ -1.76
CCDC54-201ENST00000261058 MTRRQ9UBK8 725 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 SMC3Q9UQE7 1217 aa4.05□□□□□ -1.76
CCDC54-201ENST00000261058 TSPY2A6NKD2 308 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 PLOD2O00469 737 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 ATP6V0E1O15342 81 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 AP5Z1O43299 807 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 ZNF432O94892 652 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 NADKO95544 446 aaPredicted RBP4.04□□□□□ -1.76
CCDC54-201ENST00000261058 ACSL3O95573 720 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 PENKP01210 267 aaPredicted RBP4.04□□□□□ -1.76
CCDC54-201ENST00000261058 TSPY3P0CV98 308 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 TSPY8P0CW00 308 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 NAGLUP54802 743 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 LINC01547P58512 204 aaPredicted RBP4.04□□□□□ -1.76
CCDC54-201ENST00000261058 PHEXP78562 749 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 TSPY1Q01534 308 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 PPP2R5CQ13362 524 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 NPTX1Q15818 432 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 KRTAP24-1Q3LI83 254 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 HSP90B2PQ58FF3 399 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 CYP4A22Q5TCH4 519 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 RBMS3Q6XE24 437 aaKnown RBP4.04□□□□□ -1.76
CCDC54-201ENST00000261058 PPP1R21Q6ZMI0 780 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 CCDC73Q6ZRK6 1079 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 IL17RELQ6ZVW7 336 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 CFAP206Q8IYR0 622 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 ZNF843Q8N446 348 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 IQUBQ8NA54 791 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 OR11H4Q8NGC9 324 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 OCC1Q8TAD7 63 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 PHLDA1Q8WV24 401 aaPredicted RBP4.04□□□□□ -1.76
CCDC54-201ENST00000261058 ITFG2Q969R8 447 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 CFAP53Q96M91 514 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 FAM20AQ96MK3 541 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 RHNO1Q9BSD3 238 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 S1PR5Q9H228 398 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 DCAF16Q9NXF7 216 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 FLRT3Q9NZU0 649 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 IGHV4-61A0A0C4DH41 118 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 CASTOR2A6NHX0 329 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms