RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 CLDN4O14493 209 aa13.17□□□□□ -0.3
ALPK3-201ENST00000258888 B3GALT2O43825 422 aa13.17□□□□□ -0.3
ALPK3-201ENST00000258888 ATF4P18848 351 aaPredicted RBP13.17□□□□□ -0.3
ALPK3-201ENST00000258888 XKP51811 444 aa13.17□□□□□ -0.3
ALPK3-201ENST00000258888 OR10G2Q8NGC3 310 aa13.17□□□□□ -0.3
ALPK3-201ENST00000258888 YIPF4Q9BSR8 244 aa13.17□□□□□ -0.3
ALPK3-201ENST00000258888 SRMSQ9H3Y6 488 aa13.17□□□□□ -0.3
ALPK3-201ENST00000258888 ZNF282Q9UDV7 671 aaPredicted RBP13.17□□□□□ -0.3
ALPK3-201ENST00000258888 SPIN1Q9Y657 262 aaPredicted RBP13.17□□□□□ -0.3
ALPK3-201ENST00000258888 SLC31A1O15431 190 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 OPN1SWP03999 348 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 EEFSECP57772 596 aaKnown RBP13.16□□□□□ -0.3
ALPK3-201ENST00000258888 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.16□□□□□ -0.3
ALPK3-201ENST00000258888 IL7RP16871 459 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 PGDP52209 483 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 SWI5Q1ZZU3 235 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 DPY19L1Q2PZI1 675 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 OR5AK3PQ8NH89 298 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 TMBIM1Q969X1 311 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 ZNF347Q96SE7 839 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 PCBD2Q9H0N5 130 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 IFT46Q9NQC8 304 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 FABP12A6NFH5 140 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 PSKH1P11801 424 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 RBM20Q5T481 1227 aaKnown RBP13.16□□□□□ -0.3
ALPK3-201ENST00000258888 ZC3HC1Q86WB0 502 aaKnown RBP13.16□□□□□ -0.3
ALPK3-201ENST00000258888 NTAN1Q96AB6 310 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 TBX5Q99593 518 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 PRRG4Q9BZD6 226 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 PMM2O15305 246 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 ALPIP09923 528 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 ILF3Q12906 894 aaKnown RBP eCLIP13.16□□□□□ -0.3
ALPK3-201ENST00000258888 SLBPQ14493 270 aaKnown RBP eCLIP13.16□□□□□ -0.3
ALPK3-201ENST00000258888 HERVK_113Q902F9 699 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 NTPCRQ9BSD7 190 aaKnown RBP13.16□□□□□ -0.3
ALPK3-201ENST00000258888 TAS2R7Q9NYW3 318 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 FLRT1Q9NZU1 646 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 SLC25A11Q02978 314 aaKnown RBP13.16□□□□□ -0.3
ALPK3-201ENST00000258888 CSTF1Q05048 431 aaKnown RBP13.16□□□□□ -0.3
ALPK3-201ENST00000258888 GFOD2Q3B7J2 385 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 TRMT61BQ9BVS5 477 aaKnown RBP13.16□□□□□ -0.3
ALPK3-201ENST00000258888 GRIP1Q9Y3R0 1128 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 DAPL1A0PJW8 107 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 NOGQ13253 232 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 HFE2Q6ZVN8 426 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 ZNF317Q96PQ6 595 aaPredicted RBP13.16□□□□□ -0.3
ALPK3-201ENST00000258888 MNTQ99583 582 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 CGREF1Q99674 301 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 K7EPI3 171 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 STATHP02808 62 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 PTX3P26022 381 aaPredicted RBP13.16□□□□□ -0.3
ALPK3-201ENST00000258888 IL12BP29460 328 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 CBX5P45973 191 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 GPX6P59796 221 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 ERVK-21P61565 698 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 NADK2Q4G0N4 442 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 MRPS30Q9NP92 439 aaKnown RBP13.16□□□□□ -0.3
ALPK3-201ENST00000258888 ALPPP05187 535 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 RORCP51449 518 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 EIPR1Q53HC9 387 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 SLC2A7Q6PXP3 512 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 JSRP1Q96MG2 331 aaPredicted RBP13.16□□□□□ -0.3
ALPK3-201ENST00000258888 ZDHHC2Q9UIJ5 367 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 SEPT4O43236 478 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 MTX2O75431 263 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 ZNF432O94892 652 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 CPN2P22792 545 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 ARHGDIBP52566 201 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 LGI4Q8N135 537 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 TMCO6Q96DC7 493 aa13.16□□□□□ -0.3
ALPK3-201ENST00000258888 AQP12BA6NM10 295 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 AQP12AQ8IXF9 295 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 FBXO15Q8NCQ5 510 aaPredicted RBP13.15□□□□□ -0.3
ALPK3-201ENST00000258888 OR9I1Q8NGQ6 314 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 POF1BQ8WVV4 589 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 MINDY3Q9H8M7 445 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 CERS4Q9HA82 394 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 PPP3R1P63098 170 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 SYT16Q17RD7 645 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 FBXL22Q6P050 247 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 LYSMD3Q7Z3D4 306 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 RNF39Q9H2S5 420 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 MATN2O00339 956 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 DGKGP49619 791 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 ZCCHC12Q6PEW1 402 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 TMEM110Q86TL2 294 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 CAND1Q86VP6 1230 aaKnown RBP13.15□□□□□ -0.3
ALPK3-201ENST00000258888 MGME1Q9BQP7 344 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 A0A0G2JLL6 359 aaPredicted RBP13.15□□□□□ -0.3
ALPK3-201ENST00000258888 ITGB1P05556 798 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 PRRT2Q7Z6L0 340 aaPredicted RBP13.15□□□□□ -0.3
ALPK3-201ENST00000258888 CD99L2Q8TCZ2 262 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 ZNF384Q8TF68 577 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 C12orf66Q96MD2 445 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 POLR2J2Q9GZM3 115 aaKnown RBP13.15□□□□□ -0.3
ALPK3-201ENST00000258888 VBP1P61758 197 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 PPP1R8Q12972 351 aaKnown RBP13.15□□□□□ -0.3
ALPK3-201ENST00000258888 RPS27LQ71UM5 84 aaKnown RBP13.15□□□□□ -0.3
ALPK3-201ENST00000258888 OR10Q1Q8NGQ4 319 aa13.15□□□□□ -0.3
ALPK3-201ENST00000258888 WRBO00258 174 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms