RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 CSPG4P5Q96PW8 444 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 EDEM2Q9BV94 578 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 ASB7Q9H672 318 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 SPACA1Q9HBV2 294 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 CASS4Q9NQ75 786 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 EXD2Q9NVH0 621 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 RIMS3Q9UJD0 308 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 PDE10AQ9Y233 779 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 SOCS2O14508 198 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 OR10H2O60403 315 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 APBB3O95704 486 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 FGFR1P11362 822 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 ALCAMQ13740 583 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 CAMK1Q14012 370 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 ANKRD22Q5VYY1 191 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 ADGRD1Q6QNK2 874 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 MFSD7Q6UXD7 560 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 LRRC8DQ7L1W4 858 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 C16orf59Q7L2K0 433 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 SLC9B2Q86UD5 537 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 CARM1Q86X55 608 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 DCP1BQ8IZD4 617 aaKnown RBP13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 OR4Q3Q8NH05 313 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 WDR48Q8TAF3 677 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 RNF34Q969K3 372 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 TCEAL7Q9BRU2 100 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 ANKRD60Q9BZ19 345 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 INTS10Q9NVR2 710 aaKnown RBP13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 A0A1W2PPL8 197 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 F9P00740 461 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 LDLRP01130 860 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 ADRB1P08588 477 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 PAICSP22234 425 aaKnown RBP13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 PTGIRP43119 386 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 SKP1P63208 163 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 TRIP4Q15650 581 aaPredicted RBP13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 ZNF699Q32M78 642 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 TGIF2LXQ8IUE1 241 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 BOLLQ8N9W6 283 aaKnown RBP13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 ZSCAN1Q8NBB4 408 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 LGALS12Q96DT0 336 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 VPS25Q9BRG1 176 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 CHCHD6Q9BRQ6 235 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 PXMP2Q9NR77 195 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 ZMYM5Q9UJ78 669 aa13.09□□□□□ -0.31
COLGALT1-201ENST00000252599 PKD1L3Q7Z443 1732 aa13.08□□□□□ -0.31
COLGALT1-201ENST00000252599 TSTD3H0UI37 97 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 GPR37O15354 613 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 SOX15O60248 233 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 ATG7O95352 703 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 SLC2A1P11166 492 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 FMO3P31513 532 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 MPIP34949 423 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 RPS9P46781 194 aaKnown RBP13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 GRB14Q14449 540 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 LRRC26Q2I0M4 334 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 C1orf185Q5T7R7 199 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 MCOLN2Q8IZK6 566 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 CANT1Q8WVQ1 401 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 KCNA7Q96RP8 456 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 SPSB2Q99619 263 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 GPN2Q9H9Y4 310 aaPredicted RBP13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 AKIP1Q9NQ31 210 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 FBXO10Q9UK96 956 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 PCDHA3Q9Y5H8 950 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 KRBOX1C9JBD0 128 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 CAPN5O15484 640 aaPredicted RBP13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 CD6P30203 668 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 ICAM3P32942 547 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 GZMKP49863 264 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 HLCSP50747 726 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 RBMS2Q15434 407 aaKnown RBP13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 UGT8Q16880 541 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 GDPD1Q8N9F7 314 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 LPAR1Q92633 364 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 COQ10AQ96MF6 247 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 TEFMQ96QE5 360 aaKnown RBP13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 FAM49BQ9NUQ9 324 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 SARDHQ9UL12 918 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 ZMIZ1Q9ULJ6 1067 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 STUB1Q9UNE7 303 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 DUSP12Q9UNI6 340 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 NOD1Q9Y239 953 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 CACNA1SQ13698 1873 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 NRP1O14786 923 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 SNAPINO95295 136 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 VNN1O95497 513 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 GSRP00390 522 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 UMPSP11172 480 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 HOXB3P14651 431 aaPredicted RBP13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 ZNF91Q05481 1191 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 MZT2BQ6NZ67 158 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 FBXO42Q6P3S6 717 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 ANKS1BQ7Z6G8 1248 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 THAP5Q7Z6K1 395 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 MYO19Q96H55 970 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 MUS81Q96NY9 551 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 HDHD2Q9H0R4 259 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 GPATCH2LQ9NWQ4 482 aa13.08□□□□□ -0.32
COLGALT1-201ENST00000252599 VAPAQ9P0L0 249 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms