RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 CD63P08962 238 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 OR56A5P0C7T3 313 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 BMP2P12643 396 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 MAGP20916 626 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 FOLR3P41439 243 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 ZNF75DP51815 510 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 RELBQ01201 579 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 CDH17Q12864 832 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 SEMA3AQ14563 771 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 SLC9A5Q14940 896 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 KYNUQ16719 465 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 EIF2S3LQ2VIR3 472 aaKnown RBP9.91□□□□□ -0.82
VPS50-201ENST00000251739 SYTL3Q4VX76 610 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 DNAJC21Q5F1R6 531 aaKnown RBP9.91□□□□□ -0.82
VPS50-201ENST00000251739 TSTD2Q5T7W7 516 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 AFTPHQ6ULP2 937 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 Q6ZS92 163 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 LINC00523Q86TU6 105 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 VRK3Q8IV63 474 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 IQCKQ8N0W5 287 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 ZNF655Q8N720 491 aaPredicted RBP9.91□□□□□ -0.82
VPS50-201ENST00000251739 OR52K1Q8NGK4 314 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 LKAAEAR1Q8TD35 194 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 FKBP10Q96AY3 582 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 NACC2Q96BF6 587 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 HES6Q96HZ4 224 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 FER1L6-AS2Q96M78 137 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 ZNF778Q96MU6 729 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 RANBP9Q96S59 729 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 SLC7A5P2Q9GIP4 190 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 SLC26A1Q9H2B4 701 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 WDR54Q9H977 334 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 EURLQ9NYK6 297 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 SLC2A6Q9UGQ3 507 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 ERRFI1Q9UJM3 462 aaPredicted RBP9.91□□□□□ -0.82
VPS50-201ENST00000251739 AMFRQ9UKV5 643 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 PLAGL1Q9UM63 463 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 PACSIN2Q9UNF0 486 aaPredicted RBP9.91□□□□□ -0.82
VPS50-201ENST00000251739 PLCL2Q9UPR0 1127 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 A0A0U1RQJ8 604 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 HEATR9A2RTY3 570 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 AGPSO00116 658 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 MASP2O00187 686 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 PRICKLE3O43900 615 aaPredicted RBP9.9□□□□□ -0.82
VPS50-201ENST00000251739 IPO7O95373 1038 aaKnown RBP9.9□□□□□ -0.82
VPS50-201ENST00000251739 GOT2P00505 430 aaKnown RBP9.9□□□□□ -0.82
VPS50-201ENST00000251739 ALPPP05187 535 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 CCR7P32248 378 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 GRIA1P42261 906 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 BRD3Q15059 726 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 MLIPQ5VWP3 458 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 LYPLAL1Q5VWZ2 237 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 UNC5DQ6UXZ4 953 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 COX15Q7KZN9 410 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 PEX26Q7Z412 305 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 HOOK3Q86VS8 718 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 DCUN1D3Q8IWE4 304 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 FAM20CQ8IXL6 584 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 DEPDC4Q8N2C3 294 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 TAB3Q8N5C8 712 aaPredicted RBP9.9□□□□□ -0.82
VPS50-201ENST00000251739 UBL4BQ8N7F7 174 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 CLEC1AQ8NC01 280 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 ATG4AQ8WYN0 398 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 N4BP2L2Q92802 583 aaPredicted RBP9.9□□□□□ -0.82
VPS50-201ENST00000251739 PEX13Q92968 403 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 HDAC10Q969S8 669 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 PTERQ96BW5 349 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 CARD6Q9BX69 1037 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 ZBTB20Q9HC78 741 aaPredicted RBP9.9□□□□□ -0.82
VPS50-201ENST00000251739 TXLNGQ9NUQ3 528 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 ASF1BQ9NVP2 202 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 IFT80Q9P2H3 777 aaPredicted RBP9.9□□□□□ -0.82
VPS50-201ENST00000251739 IMPACTQ9P2X3 320 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 NTNG1Q9Y2I2 539 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 TDRKHQ9Y2W6 561 aaKnown RBP9.9□□□□□ -0.82
VPS50-201ENST00000251739 KLK4Q9Y5K2 254 aa9.9□□□□□ -0.82
VPS50-201ENST00000251739 A0A1B0GX78 115 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 FITM1A5D6W6 292 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 ISM1B1AKI9 464 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 PEX12O00623 359 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 SOCS6O14544 535 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 LIASO43766 372 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 KDM1AO60341 852 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 KLHL41O60662 606 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 IPO13O94829 963 aaKnown RBP9.89□□□□□ -0.83
VPS50-201ENST00000251739 SLCO2B1O94956 709 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 FTCDO95954 541 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 CD9P21926 228 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 MMP11P24347 488 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 AOAHP28039 575 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 FDFT1P37268 417 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 NAP1L1P55209 391 aaKnown RBP9.89□□□□□ -0.83
VPS50-201ENST00000251739 NKG7Q16617 165 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 FCRL6Q6DN72 434 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 IGFL2Q6UWQ7 119 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 NLRP9Q7RTR0 991 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 CUZD1Q86UP6 607 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 SYCE1Q8N0S2 351 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 LMNTD1Q8N9Z9 388 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 OR2L8Q8NGY9 312 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms