RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 POLR1CO15160 346 aaPredicted RBP10.91□□□□□ -0.66
SF3B6-201ENST00000233468 CHRM5P08912 532 aaPredicted RBP10.91□□□□□ -0.66
SF3B6-201ENST00000233468 NELFEP18615 380 aaKnown RBP10.91□□□□□ -0.66
SF3B6-201ENST00000233468 PRDX3P30048 256 aaKnown RBP10.91□□□□□ -0.66
SF3B6-201ENST00000233468 PKLRP30613 574 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 MAPK10P53779 464 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 CDKN2DP55273 166 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 PCBP4P57723 403 aaKnown RBP10.91□□□□□ -0.66
SF3B6-201ENST00000233468 MC2RQ01718 297 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 IL11RAQ14626 422 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 USP10Q14694 798 aaKnown RBP10.91□□□□□ -0.66
SF3B6-201ENST00000233468 RBM20Q5T481 1227 aaKnown RBP10.91□□□□□ -0.66
SF3B6-201ENST00000233468 LGSNQ5TDP6 509 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 PAQR3Q6TCH7 311 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 SPESP1Q6UW49 350 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 UBE2R2Q712K3 238 aaPredicted RBP10.91□□□□□ -0.66
SF3B6-201ENST00000233468 ADGRF3Q8IZF5 1079 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 GIMAP7Q8NHV1 300 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 HMGCLL1Q8TB92 370 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 LINGO1Q96FE5 620 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 PDLIM5Q96HC4 596 aaKnown RBP10.91□□□□□ -0.66
SF3B6-201ENST00000233468 CCDC138Q96M89 665 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 RBBP8Q99708 897 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 CDC42EP4Q9H3Q1 356 aaKnown RBP10.91□□□□□ -0.66
SF3B6-201ENST00000233468 XKR8Q9H6D3 395 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 ACSS3Q9H6R3 686 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 SLC24A3Q9HC58 644 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 GPAMQ9HCL2 828 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 PDE7BQ9NP56 450 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 ASCL3Q9NQ33 180 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 SOHLH2Q9NX45 425 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 NINJ2Q9NZG7 142 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.91□□□□□ -0.66
SF3B6-201ENST00000233468 SLC17A6Q9P2U8 582 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 PCDHGA3Q9Y5H0 932 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 PSAT1Q9Y617 370 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 NFS1Q9Y697 457 aa10.91□□□□□ -0.66
SF3B6-201ENST00000233468 CXorf49A8MYA2 514 aaPredicted RBP10.9□□□□□ -0.66
SF3B6-201ENST00000233468 PYCARD-AS1I3L0S3 204 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 MYO1CO00159 1063 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 CCNDBP1O95273 360 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 ACSL3O95573 720 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 SYF2O95926 243 aaKnown RBP10.9□□□□□ -0.66
SF3B6-201ENST00000233468 INHBAP08476 426 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 F7P08709 466 aaPredicted RBP10.9□□□□□ -0.66
SF3B6-201ENST00000233468 ENO2P09104 434 aaPredicted RBP10.9□□□□□ -0.66
SF3B6-201ENST00000233468 STMN1P16949 149 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 TNFRSF8P28908 595 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 CRABP2P29373 138 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 ECHS1P30084 290 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 DEKP35659 375 aaKnown RBP10.9□□□□□ -0.66
SF3B6-201ENST00000233468 BDKRB1P46663 353 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 SEPHS1P49903 392 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 SERPINB9P50453 376 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 KPNA2P52292 529 aaKnown RBP10.9□□□□□ -0.66
SF3B6-201ENST00000233468 PMS2P54278 862 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 AP1S2P56377 157 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 FOXM1Q08050 763 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 LY6DQ14210 128 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 SLC5A12Q1EHB4 618 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 CYHR1Q6ZMK1 362 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 PIWIL4Q7Z3Z4 852 aaKnown RBP10.9□□□□□ -0.66
SF3B6-201ENST00000233468 CLEC14AQ86T13 490 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 ZNF605Q86T29 641 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 ZNF248Q8NDW4 579 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 OR8K5Q8NH50 307 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 EEF1AKMT1Q8WVE0 214 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 ATL1Q8WXF7 558 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 SMPDL3AQ92484 453 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 N4BP2L2Q92802 583 aaPredicted RBP10.9□□□□□ -0.66
SF3B6-201ENST00000233468 USP7Q93009 1102 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 TCTN2Q96GX1 697 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 SLC41A2Q96JW4 573 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 GPR22Q99680 433 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 SLC30A3Q99726 388 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 MAP3K3Q99759 626 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 CCDC77Q9BR77 488 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 SLC12A9Q9BXP2 914 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 FUT8Q9BYC5 575 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 SLC6A16Q9GZN6 736 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 CHRNA10Q9GZZ6 450 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 PARVBQ9HBI1 364 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 SMYD2Q9NRG4 433 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 UTP6Q9NYH9 597 aaKnown RBP10.9□□□□□ -0.66
SF3B6-201ENST00000233468 PLAGL1Q9UM63 463 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 UNC13CQ8NB66 2214 aa10.9□□□□□ -0.66
SF3B6-201ENST00000233468 MYO18BQ8IUG5 2567 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 IGHV5-51A0A0C4DH38 117 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 A0A0J9YY10 115 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 ARHGEF33A8MVX0 844 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 CDRT15L2A8MXV6 281 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 KLK10O43240 276 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 KIF1CO43896 1103 aaKnown RBP10.89□□□□□ -0.67
SF3B6-201ENST00000233468 KRT38O76015 456 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 TUBBP07437 444 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 ABHD2P08910 425 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 FGF3P11487 239 aaPredicted RBP10.89□□□□□ -0.67
SF3B6-201ENST00000233468 CCL4P13236 92 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 HGFP14210 728 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 UGT2B7P16662 529 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms