RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 CDC26Q8NHZ8 85 aa13.89□□□□□ -0.19
SHPK-201ENST00000225519 DNAJB3Q8WWF6 145 aa13.89□□□□□ -0.19
SHPK-201ENST00000225519 POLR1EQ9GZS1 481 aaKnown RBP13.89□□□□□ -0.19
SHPK-201ENST00000225519 ABCC13Q9NSE7 274 aa13.89□□□□□ -0.19
SHPK-201ENST00000225519 TMEM45AQ9NWC5 275 aa13.89□□□□□ -0.19
SHPK-201ENST00000225519 IMPAD1Q9NX62 359 aa13.89□□□□□ -0.19
SHPK-201ENST00000225519 ERVW-1Q9UQF0 538 aa13.89□□□□□ -0.19
SHPK-201ENST00000225519 COL4A5P29400 1685 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 KRT6AP02538 564 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 KRT6BP04259 564 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 IL12RB1P42701 662 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 GNPDA1P46926 289 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 HK3P52790 923 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 UGT2B15P54855 530 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 CHRNEQ04844 493 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 DOK6Q6PKX4 331 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 VTCN1Q7Z7D3 282 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 APOBEC3FQ8IUX4 373 aaKnown RBP13.88□□□□□ -0.19
SHPK-201ENST00000225519 ARRDC4Q8NCT1 418 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 LCTP09848 1927 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 RLFQ13129 1914 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 CASTOR2A6NHX0 329 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 KIAA0513O60268 411 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 ULK1O75385 1050 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 STSP08842 583 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 ATXN1LP0C7T5 689 aaKnown RBP13.88□□□□□ -0.19
SHPK-201ENST00000225519 ENDOUP21128 410 aaKnown RBP13.88□□□□□ -0.19
SHPK-201ENST00000225519 HTR2BP41595 481 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 CAMK2GQ13555 558 aaPredicted RBP13.88□□□□□ -0.19
SHPK-201ENST00000225519 VGLL4Q14135 290 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 ATG9BQ674R7 924 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 SIGIRRQ6IA17 410 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 GLT6D1Q7Z4J2 308 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 FBLIM1Q8WUP2 373 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 MED30Q96HR3 178 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 C16orf70Q9BSU1 422 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 ATP13A1Q9HD20 1204 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 TXNRD2Q9NNW7 524 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 NPAP1Q9NZP6 1156 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 GRIP1Q9Y3R0 1128 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 M0R082 166 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 ANKRD28O15084 1053 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 LRATO95237 230 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 HMBSP08397 361 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 TIE1P35590 1138 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 CSTF3Q12996 717 aaKnown RBP13.88□□□□□ -0.19
SHPK-201ENST00000225519 KDM4DQ6B0I6 523 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 METTL23Q86XA0 190 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 UBE2J2Q8N2K1 259 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 BEND7Q8N7W2 519 aaPredicted RBP13.88□□□□□ -0.19
SHPK-201ENST00000225519 PPTC7Q8NI37 304 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 TSSK3Q96PN8 268 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 TTPALQ9BTX7 342 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 LRTM1Q9HBL6 345 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 THUMPD1Q9NXG2 353 aaKnown RBP13.88□□□□□ -0.19
SHPK-201ENST00000225519 NDRG4Q9ULP0 352 aaKnown RBP13.88□□□□□ -0.19
SHPK-201ENST00000225519 ZNF451Q9Y4E5 1061 aa13.88□□□□□ -0.19
SHPK-201ENST00000225519 MN1Q10571 1320 aaPredicted RBP13.88□□□□□ -0.19
SHPK-201ENST00000225519 CCDC182A6NF36 153 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 FAM220BPB1ANY3 271 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 GPR182O15218 404 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 OR1I1O60431 355 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 TLR5O60602 858 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 SLITRK5O94991 958 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 MMP2P08253 660 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 COL6A1P12109 1028 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 EFNA1P20827 205 aaPredicted RBP13.87□□□□□ -0.19
SHPK-201ENST00000225519 CDKN1CP49918 316 aaPredicted RBP13.87□□□□□ -0.19
SHPK-201ENST00000225519 MADCAM1Q13477 382 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 MARCH8Q5T0T0 291 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 MSANTD2Q6P1R3 559 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 AFTPHQ6ULP2 937 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 SLC46A3Q7Z3Q1 461 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 ZNF438Q7Z4V0 828 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 SNX20Q7Z614 316 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 TMEM86AQ8N2M4 240 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 GLB1L3Q8NCI6 653 aaPredicted RBP13.87□□□□□ -0.19
SHPK-201ENST00000225519 TNKS2Q9H2K2 1166 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 NUFIP1Q9UHK0 495 aaKnown RBP13.87□□□□□ -0.19
SHPK-201ENST00000225519 ZNF490Q9ULM2 529 aaPredicted RBP13.87□□□□□ -0.19
SHPK-201ENST00000225519 VPS4AQ9UN37 437 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 TNPO3Q9Y5L0 923 aaKnown RBP13.87□□□□□ -0.19
SHPK-201ENST00000225519 A3GALT2U3KPV4 340 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 A0A0G2JMZ2 1700 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 LRRC37A2A6NM11 1700 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 MRPS14O60783 128 aaKnown RBP13.87□□□□□ -0.19
SHPK-201ENST00000225519 NAT1P18440 290 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 CSNK2BP67870 215 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 RUNX1T1Q06455 604 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 PRR23CQ6ZRP0 262 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 BHLHA9Q7RTU4 235 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 TRIM48Q8IWZ4 208 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 MSRB3Q8IXL7 192 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 GPR150Q8NGU9 434 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 OMA1Q96E52 524 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 MMP28Q9H239 520 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 SLA2Q9H6Q3 261 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 RANGRFQ9HD47 186 aaPredicted RBP13.87□□□□□ -0.19
SHPK-201ENST00000225519 BPIFA1Q9NP55 256 aa13.87□□□□□ -0.19
SHPK-201ENST00000225519 TIGARQ9NQ88 270 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms