RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 OR6C2Q9NZP2 312 aa13.22□□□□□ -0.29
UPK1A-201ENST00000222275 SPATA7Q9P0W8 599 aa13.22□□□□□ -0.29
UPK1A-201ENST00000222275 ACSL6Q9UKU0 697 aa13.22□□□□□ -0.29
UPK1A-201ENST00000222275 NOVA2Q9UNW9 492 aaKnown RBP13.22□□□□□ -0.29
UPK1A-201ENST00000222275 SDK2Q58EX2 2172 aa13.22□□□□□ -0.29
UPK1A-201ENST00000222275 A0A096LPK6 155 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 A8MU76 341 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 TRIM49D1C9J1S8 452 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 K7ENP7 123 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 ATXN7O15265 892 aaPredicted RBP13.21□□□□□ -0.29
UPK1A-201ENST00000222275 UBXN7O94888 489 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 C2P06681 752 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 JMJD7P0C870 316 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 CCDC166P0CW27 439 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 THRAP10827 490 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 MLLT3P42568 568 aaPredicted RBP13.21□□□□□ -0.29
UPK1A-201ENST00000222275 RAB28P51157 221 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 KPNA2P52292 529 aaKnown RBP13.21□□□□□ -0.29
UPK1A-201ENST00000222275 AP1S2P56377 157 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 VAC14Q08AM6 782 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 BMPR2Q13873 1038 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 ARHGAP19Q14CB8 494 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 DUS1LQ6P1R4 473 aaKnown RBP13.21□□□□□ -0.29
UPK1A-201ENST00000222275 TMEM71Q6P5X7 295 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 INO80CQ6PI98 192 aaPredicted RBP13.21□□□□□ -0.29
UPK1A-201ENST00000222275 WDR74Q6RFH5 385 aaPredicted RBP13.21□□□□□ -0.29
UPK1A-201ENST00000222275 PIWIL4Q7Z3Z4 852 aaKnown RBP13.21□□□□□ -0.29
UPK1A-201ENST00000222275 ARHGAP22Q7Z5H3 698 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 VASH2Q86V25 355 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 AMIGO1Q86WK6 493 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 BMPERQ8N8U9 685 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 OR4D9Q8NGE8 314 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 OR52E1Q8NGJ3 308 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 ACMSDQ8TDX5 336 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 JPH3Q8WXH2 748 aaPredicted RBP13.21□□□□□ -0.29
UPK1A-201ENST00000222275 SLC39A7Q92504 469 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 TTC9Q92623 222 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 SLC22A18Q96BI1 424 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 RNF31Q96EP0 1072 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 ZDHHC12Q96GR4 267 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 UBXN10Q96LJ8 280 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 UBL7Q96S82 380 aaPredicted RBP13.21□□□□□ -0.29
UPK1A-201ENST00000222275 HGH1Q9BTY7 390 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 TMEM109Q9BVC6 243 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 SLC12A9Q9BXP2 914 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 ZMYND15Q9H091 742 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 SNX15Q9NRS6 342 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 CTNNAL1Q9UBT7 734 aa13.21□□□□□ -0.29
UPK1A-201ENST00000222275 TDRKHQ9Y2W6 561 aaKnown RBP13.21□□□□□ -0.29
UPK1A-201ENST00000222275 HMX2A2RU54 273 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 PHGDHO43175 533 aaKnown RBP13.2□□□□□ -0.3
UPK1A-201ENST00000222275 WISP3O95389 354 aaPredicted RBP13.2□□□□□ -0.3
UPK1A-201ENST00000222275 TSPAN12O95859 305 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 SHBGP04278 402 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 LTA4HP09960 611 aaKnown RBP13.2□□□□□ -0.3
UPK1A-201ENST00000222275 SLC35E2BP0CK96 405 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 KRT15P19012 456 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 GCAP28676 217 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 CAPZBP47756 277 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 TMPRSS3P57727 454 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 PRKG2Q13237 762 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 TSNAXIP1Q2TAA8 658 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 SNAP47Q5SQN1 464 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 BEND6Q5SZJ8 279 aaPredicted RBP13.2□□□□□ -0.3
UPK1A-201ENST00000222275 ANKS6Q68DC2 871 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 CMC1Q7Z7K0 106 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 CARFQ8N187 725 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 OR9A1PQ8NGU1 263 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 STAG3L4Q8TBR4 150 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 ATL1Q8WXF7 558 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 NCSTNQ92542 709 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 CCDC138Q96M89 665 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 CD180Q99467 661 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 CMKLR1Q99788 373 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 SPRY4Q9C004 299 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 EPHA6Q9UF33 1036 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 PLAAQ9Y263 795 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 B3GALT1Q9Y5Z6 326 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 NFS1Q9Y697 457 aa13.2□□□□□ -0.3
UPK1A-201ENST00000222275 TLDC2A0PJX2 215 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 OR5K3A6NET4 321 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 ARHGEF33A8MVX0 844 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 C2orf74A8MZ97 194 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 MYO1CO00159 1063 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 BTN3A1O00481 513 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 TOX3O15405 576 aaPredicted RBP13.19□□□□□ -0.3
UPK1A-201ENST00000222275 KLHL2O95198 593 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 FKBP9O95302 570 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 MT-ND3P03897 115 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 ALDOAP04075 364 aaKnown RBP13.19□□□□□ -0.3
UPK1A-201ENST00000222275 TYRP1P17643 537 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 MAGEA12P43365 314 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 GFERP55789 205 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 TRA2AQ13595 282 aaKnown RBP eCLIP13.19□□□□□ -0.3
UPK1A-201ENST00000222275 CSHL1Q14406 222 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 ZNF460Q14592 562 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 KIR2DS3Q14952 304 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 ACAP2Q15057 778 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 CDKL4Q5MAI5 379 aa13.19□□□□□ -0.3
UPK1A-201ENST00000222275 TMEM207Q6UWW9 146 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms