RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CCDC90BQ9GZT6 254 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 NECTIN3Q9NQS3 549 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 HCSTQ9UBK5 93 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 SNX6Q9UNH7 406 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 TPRKBQ9Y3C4 175 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 U3KQV3 271 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 THSD7BQ9C0I4 1608 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 EIF3FO00303 357 aaPredicted RBP12.97□□□□□ -0.33
SRP54-201ENST00000216774 KPNA4O00629 521 aaPredicted RBP12.97□□□□□ -0.33
SRP54-201ENST00000216774 SOCS5O75159 536 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 XYLBO75191 536 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 EPORP19235 508 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 ACVR2AP27037 513 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 HNF1BP35680 557 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 SPAM1P38567 509 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 ARHGDIAP52565 204 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 CBX3Q13185 183 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 BOP1Q14137 746 aaKnown RBP12.97□□□□□ -0.33
SRP54-201ENST00000216774 CHRNA6Q15825 494 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 CPSF6Q16630 551 aaKnown RBP eCLIP12.97□□□□□ -0.33
SRP54-201ENST00000216774 LRRC70Q7Z2Q7 622 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 SERPINA11Q86U17 422 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 TCAIMQ8N3R3 496 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 MCOLN3Q8TDD5 553 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 RORBQ92753 470 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 CMTM7Q96FZ5 175 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 DUSP21Q9H596 190 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 TM9SF3Q9HD45 589 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 IL1RAPQ9NPH3 570 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 SELENONQ9NZV5 590 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 INTS6Q9UL03 887 aaKnown RBP12.97□□□□□ -0.33
SRP54-201ENST00000216774 LRFN2Q9ULH4 789 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 C2orf78A6NCI8 922 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 AGAP14A8MT82 685 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 HOXA2O43364 376 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 CA12O43570 354 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 MRPS14O60783 128 aaKnown RBP12.96□□□□□ -0.33
SRP54-201ENST00000216774 CLDN7O95471 211 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 SLC10A3P09131 477 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 MYCLP1P12525 358 aaPredicted RBP12.96□□□□□ -0.33
SRP54-201ENST00000216774 CDH3P22223 829 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 OR1D2P34982 312 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 IDUAP35475 653 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 CSKP41240 450 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 NSG1P42857 185 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 CSNK1DP48730 415 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 RPIAP49247 311 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 SREBF2Q12772 1141 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 CDH18Q13634 790 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 EGFLAMQ63HQ2 1017 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 OR2T5Q6IEZ7 315 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 RETSATQ6NUM9 610 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 CYP4Z1Q86W10 505 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 TTC16Q8NEE8 873 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 OR7A2PQ8NGA2 310 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 OR2T29Q8NH02 315 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 CNIH3Q8TBE1 160 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 BCL7CQ8WUZ0 217 aaPredicted RBP12.96□□□□□ -0.33
SRP54-201ENST00000216774 SELENOMQ8WWX9 145 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 MTFMTQ96DP5 389 aaKnown RBP12.96□□□□□ -0.33
SRP54-201ENST00000216774 TRMT2BQ96GJ1 504 aaKnown RBP12.96□□□□□ -0.33
SRP54-201ENST00000216774 INPP5KQ9BT40 448 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 C2orf49Q9BVC5 232 aaPredicted RBP12.96□□□□□ -0.33
SRP54-201ENST00000216774 TM6SF2Q9BZW4 377 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 ELOVL6Q9H5J4 265 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 AKIP1Q9NQ31 210 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 ARL15Q9NXU5 204 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 VNN3Q9NY84 501 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 BACE2Q9Y5Z0 518 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 DGKBQ9Y6T7 804 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 SCN8AQ9UQD0 1980 aa12.96□□□□□ -0.33
SRP54-201ENST00000216774 KCNE1BA0A087WTH5 132 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 K7ERQ8 282 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 RFXANKO14593 260 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 SERPINB7O75635 380 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 PPP3CCP48454 512 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 SLC35A2P78381 396 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 ABRQ12979 859 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 KDM4DQ6B0I6 523 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 MBOAT1Q6ZNC8 495 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 TPGS1Q6ZTW0 290 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 B3GNT8Q7Z7M8 397 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 NPAS4Q8IUM7 802 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 ITPKCQ96DU7 683 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 ZNF641Q96N77 438 aaPredicted RBP12.96□□□□□ -0.34
SRP54-201ENST00000216774 MROQ9BYG7 248 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 SCN3BQ9NY72 215 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 AFF4Q9UHB7 1163 aaKnown RBP12.96□□□□□ -0.34
SRP54-201ENST00000216774 PPT2Q9UMR5 302 aa12.96□□□□□ -0.34
SRP54-201ENST00000216774 SERTM1A2A2V5 107 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 TMEM88BA6NKF7 163 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 EVPLLA8MZ36 301 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 GFRA2O00451 464 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 XPNPEP2O43895 674 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 FTH1P02794 183 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 GSNP06396 782 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 SDC1P18827 310 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 TRPC1P48995 793 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 CCR3P51677 355 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 MVKQ03426 396 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms