RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 INO80EQ8NBZ0 244 aaPredicted RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 XAGE5Q8WWM1 108 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 ULBP1Q9BZM6 244 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 ZNF350Q9GZX5 532 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 TSPAN16Q9UKR8 245 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 ADGRL3Q9HAR2 1447 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 RGPD8O14715 1765 aaPredicted RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 PLK4O00444 970 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 FCER2P06734 321 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 C8AP07357 584 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 OR4D2P58180 307 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 ITPRIPL2Q3MIP1 535 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 GPRIN3Q6ZVF9 776 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 PLXDC1Q8IUK5 500 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 DAZLQ92904 295 aaKnown RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 FGGYQ96C11 551 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 DPAGT1Q9H3H5 408 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 FAM124BQ9H5Z6 455 aaPredicted RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 SPATA31E1Q6ZUB1 1445 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 TEX13DA0A0J9YY54 714 aaPredicted RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 GLYATL1P3A0A0U1RQE8 302 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 PRORSD1PA6NEY8 169 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 MPZL2O60487 215 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 VNN2O95498 520 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 RHCEP18577 417 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 SHMT1P34896 483 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 MAGEA12P43365 314 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 GNMTQ14749 295 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 KPNB1Q14974 876 aaKnown RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 TMEM220Q6QAJ8 160 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 VANGL1Q8TAA9 524 aaPredicted RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 LCORQ96JN0 433 aaPredicted RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 ACTR6Q9GZN1 396 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 SH3BGRL2Q9UJC5 107 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 TMEM184BQ9Y519 407 aaPredicted RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 C2orf74A8MZ97 194 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 ADM5C9JUS6 153 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 RFXANKO14593 260 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 TSPAN4O14817 238 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 ANKRD26P1Q6NSI1 321 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 BPIFB1Q8TDL5 484 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 DDX1Q92499 740 aaKnown RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 DPH3Q96FX2 82 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 REEP2Q9BRK0 252 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 GPATCH1Q9BRR8 931 aaKnown RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 WRAP53Q9BUR4 548 aaKnown RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 BPIFA1Q9NP55 256 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 MYNNQ9NPC7 610 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 A8MVM7 634 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 RNASET2O00584 256 aaKnown RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 APBB3O95704 486 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 CHN1P15882 459 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 ZNF12P17014 697 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 ADH7P40394 386 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 NUMBP49757 651 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 GALCP54803 685 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 PKNOX1P55347 436 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 SLC24A5Q71RS6 500 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 AMZ2Q86W34 360 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 PROKR2Q8NFJ6 384 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 HTR3CQ8WXA8 447 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 PRRX2Q99811 253 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 SLC30A2Q9BRI3 323 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 MARCH7Q9H992 704 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 ZNF446Q9NWS9 450 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 MED11Q9P086 117 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 LILRB5O75023 590 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 MAP3K6O95382 1288 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 FGF1P05230 155 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 P2RX1P51575 399 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 CCR8P51685 355 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 PTENP60484 403 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 RASA2Q15283 850 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 OASLQ15646 514 aaKnown RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 NTRK2Q16620 822 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 PARP6Q2NL67 630 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 RAET1LQ5VY80 246 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 ENPP6Q6UWR7 440 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 C4orf33Q8N1A6 199 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 TAS1R2Q8TE23 839 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 WNT8BQ93098 351 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 CNDP2Q96KP4 475 aaKnown RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 DDX47Q9H0S4 455 aaKnown RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 BLOC1S4Q9NUP1 217 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 SLC27A5Q9Y2P5 690 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 MAP3K4Q9Y6R4 1608 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 PZPP20742 1482 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 A8MXE2 369 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 CHEK1O14757 476 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 C9P02748 559 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 PRDX6P30041 224 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 SLC10A1Q14973 349 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 C9orf152Q5JTZ5 239 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 CNKSR3Q6P9H4 555 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 PGAM4Q8N0Y7 254 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 OR8K5Q8NH50 307 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 C11orf24Q96F05 449 aaPredicted RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 KCNH6Q9H252 994 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 SEMA4BQ9NPR2 832 aaPredicted RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 A8MVJ9 347 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms