RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.77□□□□□ -0.53
CHPF2-201ENST00000035307 KIAA1191Q96A73 305 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 EXOSC8Q96B26 276 aaKnown RBP11.77□□□□□ -0.53
CHPF2-201ENST00000035307 MCMBPQ9BTE3 642 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 TPSD1Q9BZJ3 242 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 C1orf21Q9H246 121 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 KRT84Q9NSB2 600 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 INTS10Q9NVR2 710 aaKnown RBP11.77□□□□□ -0.53
CHPF2-201ENST00000035307 NUDT4Q9NZJ9 180 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 CA5BQ9Y2D0 317 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 DRGXA6NNA5 263 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 BBIP1A8MTZ0 92 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 ZNF487B1APH4 448 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 BHMG1C9JSJ3 638 aaPredicted RBP11.76□□□□□ -0.53
CHPF2-201ENST00000035307 THRBP10828 461 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 RRM2P31350 389 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 METAP1P53582 386 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 PLA2G16P53816 162 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 C2orf80Q0P641 193 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 PON2Q15165 354 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 CPTPQ5TA50 214 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 FAM43BQ6ZT52 329 aaPredicted RBP11.76□□□□□ -0.53
CHPF2-201ENST00000035307 CHSY3Q70JA7 882 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 LIMS2Q7Z4I7 341 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 KIAA2013Q8IYS2 634 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 AHI1Q8N157 1196 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 FRMD1Q8N878 549 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 OR4A15Q8NGL6 344 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 NELL1Q92832 810 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 CLP1Q92989 425 aaKnown RBP11.76□□□□□ -0.53
CHPF2-201ENST00000035307 CLIP3Q96DZ5 547 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 VPS35Q96QK1 796 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 TTLL2Q9BWV7 592 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 IL26Q9NPH9 171 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 SPTBP11277 2137 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 CROCCQ5TZA2 2017 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 K7EPI3 171 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 MID1O15344 667 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 BCAS2O75934 225 aaPredicted RBP11.76□□□□□ -0.53
CHPF2-201ENST00000035307 RASGRP1O95267 797 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 CYP17A1P05093 508 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 CAPN3P20807 821 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 FMO3P31513 532 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 ARRB2P32121 409 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 HPCAL1P37235 193 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 BDKRB1P46663 353 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 ARCN1P48444 511 aaKnown RBP11.76□□□□□ -0.53
CHPF2-201ENST00000035307 KCNC1P48547 511 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 PCYT1AP49585 367 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 MRPS15P82914 257 aaKnown RBP11.76□□□□□ -0.53
CHPF2-201ENST00000035307 GTDC1Q4AE62 458 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 BROXQ5VW32 411 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 TPRG1Q6ZUI0 275 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 HID1Q8IV36 788 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 GPR26Q8NDV2 337 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 XAGE5Q8WWM1 108 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 ITCHQ96J02 903 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 NSMCE3Q96MG7 304 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 ZNF599Q96NL3 588 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 CGREF1Q99674 301 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 RC3H2Q9HBD1 1191 aaKnown RBP11.76□□□□□ -0.53
CHPF2-201ENST00000035307 ABCB10Q9NRK6 738 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 FARSBQ9NSD9 589 aaKnown RBP11.76□□□□□ -0.53
CHPF2-201ENST00000035307 IGSF5Q9NSI5 407 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 MAGEL2Q9UJ55 1249 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 SPTA1P02549 2419 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 CXCR6O00574 342 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 HOXB2P14652 356 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 CD1EP15812 388 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 ALOX12P18054 663 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 RUNX1T1Q06455 604 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 RUNX3Q13761 415 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 SNAP47Q5SQN1 464 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 CES4AQ5XG92 561 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 HIPK1Q86Z02 1210 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 OR7A2PQ8NGA2 310 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 GTPBP3Q969Y2 492 aaKnown RBP11.76□□□□□ -0.53
CHPF2-201ENST00000035307 OTUB1Q96FW1 271 aaPredicted RBP11.76□□□□□ -0.53
CHPF2-201ENST00000035307 C1orf109Q9NX04 203 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 IKZF3Q9UKT9 509 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 CA14Q9ULX7 337 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 USP22Q9UPT9 525 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 ZNF451Q9Y4E5 1061 aa11.76□□□□□ -0.53
CHPF2-201ENST00000035307 WNT9AO14904 365 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 SNAP29O95721 258 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 GRK3P35626 688 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 CLCN4P51793 760 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 TNFAIP8L2Q6P589 184 aaPredicted RBP11.75□□□□□ -0.53
CHPF2-201ENST00000035307 NCEH1Q6PIU2 408 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 CRTC1Q6UUV9 634 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 KCTD8Q6ZWB6 473 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 SNX20Q7Z614 316 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 NPAS3Q8IXF0 933 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 FIBINQ8TAL6 211 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 NXPE3Q969Y0 559 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 IL17FQ96PD4 163 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 BTBD9Q96Q07 612 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 ZCCHC2Q9C0B9 1178 aaKnown RBP11.75□□□□□ -0.53
CHPF2-201ENST00000035307 CRISPLD2Q9H0B8 497 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 RAB26Q9ULW5 256 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms