RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 GOLM1Q8NBJ4 401 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 OR9A1PQ8NGU1 263 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 WDR20Q8TBZ3 569 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 ZNF480Q8WV37 535 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 TMEM125Q96AQ2 219 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 NAF1Q96HR8 494 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 LRCH3Q96II8 777 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 ZNF570Q96NI8 536 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 SGPP1Q9BX95 441 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 VCX3BQ9H321 246 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 CMTM6Q9NX76 183 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 ZFC3H1O60293 1989 aaKnown RBP13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 PRSS51A0A1B0GVH4 220 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 TCRBV3S1A0A5B6 114 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 KRT87PA6NCN2 255 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 CLGNO14967 610 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 PLRG1O43660 514 aaKnown RBP13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 PEX1O43933 1283 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 PCCBP05166 539 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 IL6P05231 212 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 BCKDHAP12694 445 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 CD22P20273 847 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 MAPK1P28482 360 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 MSX2P35548 267 aaPredicted RBP13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 RPS21P63220 83 aaKnown RBP13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 RHDQ02161 417 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 DOC2AQ14183 400 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 FXNQ16595 210 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 TMEM259Q4ZIN3 620 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 XKR6Q5GH73 641 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 CAPN13Q6MZZ7 669 aaPredicted RBP13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 KIAA1211LQ6NV74 962 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 CRTC3Q6UUV7 619 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 TRMT11Q7Z4G4 463 aaKnown RBP13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 PDZD3Q86UT5 571 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 LRRTM4Q86VH4 590 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 AMZ2Q86W34 360 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 LIX1Q8N485 282 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 TP53I13Q8NBR0 393 aaPredicted RBP13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 FAM156AQ8NDB6 213 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 FOXJ1Q92949 421 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 SLC45A3Q96JT2 553 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 DPY30Q9C005 99 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 ZDHHC5Q9C0B5 715 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 CLMPQ9H6B4 373 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 C8orf33Q9H7E9 229 aaPredicted RBP13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 MCM8Q9UJA3 840 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 SCML1Q9UN30 329 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 ZFR2Q9UPR6 939 aaKnown RBP13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 TMEM98Q9Y2Y6 226 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 MTCH2Q9Y6C9 303 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 KCNE2Q9Y6J6 123 aa13.89□□□□□ -0.19
RTFDC1-201ENST00000023939 COL4A2P08572 1712 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 A0A1W2PQF6 199 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 ADAM23O75077 832 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 RNASEH2AO75792 299 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 CAPNS1P04632 268 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 TCN1P20061 433 aaPredicted RBP13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 SEC13P55735 322 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 CLDN8P56748 225 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 MRPS22P82650 360 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 FGL2Q14314 439 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 CAPRIN1Q14444 709 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 NFE2L1Q14494 772 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 AAK1Q2M2I8 961 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 SUSD1Q6UWL2 747 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 DLEU7Q6UYE1 221 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 FAM83HQ6ZRV2 1179 aaPredicted RBP13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 HID1Q8IV36 788 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 LRRC56Q8IYG6 542 aaPredicted RBP13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 KIAA2013Q8IYS2 634 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 IL17RCQ8NAC3 791 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 DNAJB8Q8NHS0 232 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 ASB12Q8WXK4 309 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 ZNF184Q99676 751 aaPredicted RBP13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 MKRN2Q9H000 416 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 PCDHAC1Q9H158 963 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 EHD1Q9H4M9 534 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 BRF2Q9HAW0 419 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 IL1RL2Q9HB29 575 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 SPATA6Q9NWH7 488 aaPredicted RBP13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 FBXL12Q9NXK8 326 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 TICRRQ7Z2Z1 1910 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 CEP290O15078 2479 aa13.88□□□□□ -0.19
RTFDC1-201ENST00000023939 E7EQ34 232 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 KMOO15229 486 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 DNAJA2O60884 412 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 STAMBPO95630 424 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 DRD1P21728 446 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 NEK2P51955 445 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 CLNS1AP54105 237 aaKnown RBP13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 MRPS21P82921 87 aaKnown RBP13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 DMPKQ09013 629 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 PWP1Q13610 501 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 PTGR1Q14914 329 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 IRF4Q15306 451 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 METRNLQ641Q3 311 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 SLCO4C1Q6ZQN7 724 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 DHFR2Q86XF0 187 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 PTRH1Q86Y79 214 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms