RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Tmem207P86045 143 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ptpn2Q06180 406 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gm1123Q1RME4 390 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 HelqQ2VPA6 1069 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Atf7ip2Q3UL97 452 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Sez6l2Q4V9Z5 910 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Il12rb1Q60837 738 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Anks6Q6GQX6 883 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Doxl2Q6IMK7 723 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Pdcl3Q8BVF2 240 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Poglut1Q8BYB9 392 aaKnown RBP11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 TiparpQ8C1B2 657 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Krtcap3Q8K177 240 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Agfg1Q8K2K6 561 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 NotumQ8R116 503 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Olfr820Q8VFU5 312 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 MrgprgQ91ZB5 289 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Q9CPZ3 230 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Prr23a3Q9CWP9 254 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Snf8Q9CZ28 258 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Atp5dQ9D3D9 168 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ddi1Q9DAF3 408 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Slc25a13Q9QXX4 676 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Rfwd2Q9R1A8 733 aaKnown RBP11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Kiaa1522A2A7S8 1013 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Cyp4a32A2A8T1 509 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Dhx35A2ACQ1 703 aaKnown RBP11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Zfp229E9PWT2 705 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Rhox2gL7MUB9 191 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gstm6O35660 218 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Zw10O54692 779 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Banf1O54962 89 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Slc6a18O88576 615 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Znf703P0CL69 594 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Cd63P41731 238 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Sox3P53784 375 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Cyp2a12P56593 492 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Mmp11Q02853 492 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 DtlQ3TLR7 729 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Nkx6-3Q3UHX8 262 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gm10488Q4KL05 212 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Pdp2Q504M2 532 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ifi47Q61635 420 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Zfp454Q80Y34 536 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Plin5Q8BVZ1 463 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gprin3Q8BWS5 763 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Peli3Q8BXR6 445 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Cars2Q8BYM8 551 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 SowahcQ8C0J6 512 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Spata2Q8K004 515 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Mmgt1Q8K273 131 aaKnown RBP11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 BroxQ8K2Q7 411 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ccm2Q8K2Y9 453 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 FRRS1Q8K385 592 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Olfr382Q8VF79 312 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tti1Q91V83 1085 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Snx11Q91WL6 271 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Pcdhga10Q91XY9 930 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Nt5c1bQ91YE9 573 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Sntb1Q99L88 537 aaKnown RBP11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Snx2Q9CWK8 519 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Stard5Q9EPQ7 213 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Epb41l1Q9Z2H5 879 aa11.73□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Celsr3Q91ZI0 3301 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 DspE9Q557 2883 aaKnown RBP11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Vmn2r-ps130A0A140T8U3 855 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Olfr1164A2AVT5 326 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ttll2A4Q9E4 540 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Card6E9PWH2 1175 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 1700017D01RikG5E851 209 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Syngr1O55100 234 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 SftpbP50405 377 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Csrp3P50462 194 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 RoraP51448 523 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Hrh1P70174 488 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Polr2cP97760 275 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Pcnx4Q3UVY5 1174 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 EgflamQ4VBE4 1017 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Abcd2Q61285 741 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Mfsd4aQ6PDC8 510 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 D11Wsu47eQ6PIX9 558 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 PrlhrQ6VMN6 370 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Olfr527Q7TRT9 305 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Adamtsl2Q7TSK7 957 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Cep104Q80V31 926 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Eme1Q8BJW7 570 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gpat3Q8C0N2 438 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Snx24Q9CRB0 169 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Zdhhc4Q9D6H5 343 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ppa1Q9D819 289 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 B3galt5Q9JI67 308 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 DptQ9QZZ6 201 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Atp6ap1Q9R1Q9 463 aa11.72□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Znf711A2ANX9 761 aa11.71□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Znf382B2RXC5 579 aa11.71□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Mptx2D3YYJ7 219 aa11.71□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Erich1E9PY43 332 aa11.71□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Zfp94E9Q6Y4 486 aa11.71□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gm3424L7N298 263 aa11.71□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gm8246M0QWX9 263 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms