RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 KYNUQ16719 465 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 PTCHD3Q3KNS1 767 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 PLEKHN1Q494U1 663 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-222ENST00000641587 PLEKHS1Q5SXH7 462 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 CES3Q6UWW8 571 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 FAM151BQ6UXP7 276 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 DET1Q7L5Y6 550 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 AMZ2Q86W34 360 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 IGDCC3Q8IVU1 814 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 DSELQ8IZU8 1212 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 AGGF1Q8N302 714 aaeCLIP9.72□□□□□ -0.85
PHGDH-222ENST00000641587 UHMK1Q8TAS1 419 aaKnown RBP9.72□□□□□ -0.85
PHGDH-222ENST00000641587 PNPLA2Q96AD5 504 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 INSM2Q96T92 566 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-222ENST00000641587 WDR83Q9BRX9 315 aaKnown RBP9.72□□□□□ -0.85
PHGDH-222ENST00000641587 NAT9Q9BTE0 207 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 SLC29A3Q9BZD2 475 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 WWP1Q9H0M0 922 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 IL26Q9NPH9 171 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 RAD18Q9NS91 495 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 ASF1BQ9NVP2 202 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 HRASLS2Q9NWW9 162 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 SOHLH2Q9NX45 425 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 GPR83Q9NYM4 423 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.72□□□□□ -0.85
PHGDH-222ENST00000641587 HACD3Q9P035 362 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 TCFL5Q9UL49 500 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 SOX13Q9UN79 622 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 TCAF1Q9Y4C2 921 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 TEX264Q9Y6I9 313 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 CSMD2Q7Z408 3487 aa9.71□□□□□ -0.85
PHGDH-222ENST00000641587 MAGEB16A2A368 324 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 OR6C74A6NCV1 312 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 C2orf81A6NN90 581 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 GAPDHSO14556 408 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-222ENST00000641587 RIPK2O43353 540 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 CBX6O95503 412 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 ZBTB11O95625 1053 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-222ENST00000641587 CRTAMO95727 393 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 TTC4O95801 387 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 POLBP06746 335 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 PAMP19021 973 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 POLR2CP19387 275 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-222ENST00000641587 SSTR1P30872 391 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 HSD17B3P37058 310 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 FOXL2P58012 376 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 TMPRSS15P98073 1019 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 DMPKQ09013 629 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 PTPRCAPQ14761 206 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 CRYMQ14894 314 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 TAF1AQ15573 450 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-222ENST00000641587 ZNF789Q5FWF6 425 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 SPANXN3Q5MJ09 141 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 BEND6Q5SZJ8 279 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-222ENST00000641587 GPRC6AQ5T6X5 926 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 TMEM220Q6QAJ8 160 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 UNC5AQ6ZN44 842 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 NLRP9Q7RTR0 991 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 OOSP2Q86WS3 158 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 KMT5CQ86Y97 462 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 RELL1Q8IUW5 271 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 TMEM151BQ8IW70 566 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 SRRM1Q8IYB3 904 aaKnown RBP9.71□□□□□ -0.86
PHGDH-222ENST00000641587 SYTL1Q8IYJ3 562 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 CISD2Q8N5K1 135 aaKnown RBP9.71□□□□□ -0.86
PHGDH-222ENST00000641587 LILRA3Q8N6C8 439 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-222ENST00000641587 OTUD6BQ8N6M0 293 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.71□□□□□ -0.86
PHGDH-222ENST00000641587 OR1L3Q8NH93 324 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 BRSK1Q8TDC3 778 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 ANKRD7Q92527 254 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 INPP5DQ92835 1189 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 CLIP3Q96DZ5 547 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 C12orf66Q96MD2 445 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 SRPK1Q96SB4 655 aaKnown RBP9.71□□□□□ -0.86
PHGDH-222ENST00000641587 CD180Q99467 661 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 SMAD5Q99717 465 aaKnown RBP9.71□□□□□ -0.86
PHGDH-222ENST00000641587 TRIM56Q9BRZ2 755 aaKnown RBP9.71□□□□□ -0.86
PHGDH-222ENST00000641587 NLNQ9BYT8 704 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 TXLNGYQ9BZA5 131 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 KLHL25Q9H0H3 589 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 PPANQ9NQ55 473 aaKnown RBP9.71□□□□□ -0.86
PHGDH-222ENST00000641587 CHRAC1Q9NRG0 131 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 PCMTD2Q9NV79 361 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 BTRCQ9Y297 605 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 PCDHGB7Q9Y5F8 929 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 ARL5AQ9Y689 179 aa9.71□□□□□ -0.86
PHGDH-222ENST00000641587 DIDO1Q9BTC0 2240 aaKnown RBP9.71□□□□□ -0.86
PHGDH-222ENST00000641587 ABCA12Q86UK0 2595 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 A0A087WUV0 522 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-222ENST00000641587 FAM237BA0A1B0GVD1 139 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 SLC9B1P1A6NJY1 282 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 TMEM150CB9EJG8 249 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 STX7O15400 261 aaKnown RBP9.7□□□□□ -0.86
PHGDH-222ENST00000641587 KLK3P07288 261 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-222ENST00000641587 GSTA2P09210 222 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 RAB40ALP0C0E4 278 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 NMBRP28336 390 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 OTX2P32243 289 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 STX2P32856 288 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms