RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 FAM131CQ96AQ9 280 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 LGR4Q9BXB1 951 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 LRTM1Q9HBL6 345 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 SLC52A3Q9NQ40 469 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 MAP10Q9P2G4 905 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 F5P12259 2224 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 KCNE1BA0A087WTH5 132 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 A0A1W2PQF6 199 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 C9JVG2 144 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 ADAM23O75077 832 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 PDYNP01213 254 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 JUPP14923 745 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 SESN3P58005 492 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 CACHD1Q5VU97 1274 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 PRMT9Q6P2P2 845 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 HIPK4Q8NE63 616 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 OR56A3Q8NH54 315 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 C1QTNF2Q9BXJ5 285 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 TTYH1Q9H313 450 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-208ENST00000641023 KCNK12Q9HB15 430 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 S100A14Q9HCY8 104 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 MBNL1Q9NR56 388 aaKnown RBP16.8■□□□□ 0.28
PHGDH-208ENST00000641023 C1orf109Q9NX04 203 aa16.8■□□□□ 0.28
PHGDH-208ENST00000641023 ZFR2Q9UPR6 939 aaKnown RBP16.8■□□□□ 0.28
PHGDH-208ENST00000641023 POLR3HQ9Y535 204 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-208ENST00000641023 KLHL33A6NCF5 533 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 C2CD4DB7Z1M9 353 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 GCKP35557 465 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 MRPS21P82921 87 aaKnown RBP16.79■□□□□ 0.28
PHGDH-208ENST00000641023 ZNF33BQ06732 778 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 XKR6Q5GH73 641 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 HABP4Q5JVS0 413 aaKnown RBP16.79■□□□□ 0.28
PHGDH-208ENST00000641023 SAMD4BQ5PRF9 694 aaKnown RBP16.79■□□□□ 0.28
PHGDH-208ENST00000641023 FRG2Q64ET8 278 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 SLC44A3Q8N4M1 653 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 MINDY1Q8N5J2 469 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 DNASE1L2Q92874 299 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 FRG2BQ96QU4 278 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 TACO1Q9BSH4 297 aaKnown RBP16.79■□□□□ 0.28
PHGDH-208ENST00000641023 C1QTNF7Q9BXJ2 289 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 PHPT1Q9NRX4 125 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-208ENST00000641023 TMEM181Q9P2C4 612 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 CIDEBQ9UHD4 219 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 LEF1Q9UJU2 399 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-208ENST00000641023 PRKAB1Q9Y478 270 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 ZFC3H1O60293 1989 aaKnown RBP16.79■□□□□ 0.28
PHGDH-208ENST00000641023 PRR23AA6NEV1 266 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 IFRD1O00458 451 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-208ENST00000641023 CLGNO14967 610 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 EEDO75530 441 aaKnown RBP16.79■□□□□ 0.28
PHGDH-208ENST00000641023 RSL1D1O76021 490 aaKnown RBP16.79■□□□□ 0.28
PHGDH-208ENST00000641023 ANPEPP15144 967 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 XRCC1P18887 633 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-208ENST00000641023 JAK1P23458 1154 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 ACADLP28330 430 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 ZFP36L2P47974 494 aaKnown RBP16.79■□□□□ 0.28
PHGDH-208ENST00000641023 IRF4Q15306 451 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 MAP7D1Q3KQU3 841 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 CAPN13Q6MZZ7 669 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-208ENST00000641023 XKR5Q6UX68 686 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 UNC5DQ6UXZ4 953 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 KBTBD6Q86V97 674 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 SYTL1Q8IYJ3 562 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 OR9A1PQ8NGU1 263 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 VPS33AQ96AX1 596 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 ASB9Q96DX5 294 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 SLC17A9Q9BYT1 436 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 ACPTQ9BZG2 426 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 ASIC5Q9NY37 505 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 OR1A2Q9Y585 309 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 KCNE2Q9Y6J6 123 aa16.79■□□□□ 0.28
PHGDH-208ENST00000641023 TBC1D3DA0A087WVF3 549 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 TBC1D3IA0A087WXS9 549 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 TBC1D3EA0A087X179 549 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 TBC1D3KA0A087X1G2 549 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 A0A1W2PQU0 124 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 SERTM1A2A2V5 107 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 TBC1D3FA6NER0 549 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-208ENST00000641023 TBC1D3LB9A6J9 549 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 TBC1D3HP0C7X1 549 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 TCN1P20061 433 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-208ENST00000641023 MSX2P35548 267 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-208ENST00000641023 HNF4AP41235 474 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 FOXM1Q08050 763 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 SFSWAPQ12872 951 aaKnown RBP16.78■□□□□ 0.28
PHGDH-208ENST00000641023 TRIM25Q14258 630 aaKnown RBP16.78■□□□□ 0.28
PHGDH-208ENST00000641023 WLSQ5T9L3 541 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 TBC1D3GQ6DHY5 549 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 TBC1D3CQ6IPX1 549 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 ZFAND4Q86XD8 727 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 TBC1D3Q8IZP1 549 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-208ENST00000641023 TP53I13Q8NBR0 393 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-208ENST00000641023 ZNF480Q8WV37 535 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 PYDC1Q8WXC3 89 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 LRRC58Q96CX6 371 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 SIPA1Q96FS4 1042 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 GPATCH1Q9BRR8 931 aaKnown RBP16.78■□□□□ 0.28
PHGDH-208ENST00000641023 OR52A5Q9H2C5 316 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 IL1RL2Q9HB29 575 aa16.78■□□□□ 0.28
PHGDH-208ENST00000641023 ITM2CQ9NQX7 267 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 246.1 ms