RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	PPP2R5D	Q14738	602 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	SMAD2	Q15796	467 aa	Known RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	NEDD8	Q15843	81 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	SV2C	Q496J9	727 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	STEAP3	Q658P3	488 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	TAF2	Q6P1X5	1199 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	ARHGAP11A	Q6P4F7	1023 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	DARS2	Q6PI48	645 aa	Known RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	COMMD7	Q86VX2	200 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	DEFB107A	Q8IZN7	70 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	ZNF687	Q8N1G0	1237 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	TXNDC5	Q8NBS9	432 aa	Known RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	MAGEE2	Q8TD90	523 aa	Predicted RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	HEXDC	Q8WVB3	486 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	EDEM1	Q92611	657 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	NXPE2	Q96DL1	559 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	PCED1B	Q96HM7	432 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	RNF157	Q96PX1	679 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	COPS4	Q9BT78	406 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	UNC93B1	Q9H1C4	597 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	SPNS1	Q9H2V7	528 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	LRRC4	Q9HBW1	653 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	BIN3	Q9NQY0	253 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	DNAJC28	Q9NX36	388 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	ABCD2	Q9UBJ2	740 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	MBD1	Q9UIS9	605 aa	Predicted RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	KCNK7	Q9Y2U2	307 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	LAMA3	Q16787	3333 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	YJEFN3	A6XGL0	299 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	FAM72C	H0Y354	149 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931		H0Y626	953 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	AKAP8	O43823	692 aa	Known RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	ENDOD1	O94919	500 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	LCK	P06239	509 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	TH	P07101	528 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	F7	P08709	466 aa	Predicted RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	RBP1	P09455	135 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	USP17L7	P0C7H9	530 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	DHRS4L1	P0CG22	281 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	COX5B	P10606	129 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	GNS	P15586	552 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	GOT1	P17174	413 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	KCNA5	P22460	613 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	EEF1B2	P24534	225 aa	Known RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	CYP2F1	P24903	491 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	PTAFR	P25105	342 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	PTPN7	P35236	360 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	SLC15A1	P46059	708 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	NUMB	P49757	651 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	VASP	P50552	380 aa	Predicted RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	BCAT1	P54687	386 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	RPP30	P78346	268 aa	Known RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	MRPS22	P82650	360 aa	Known RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	DOC2A	Q14183	400 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	FLOT2	Q14254	428 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	ACOX1	Q15067	660 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	NRF1	Q16656	503 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	GPAT3	Q53EU6	434 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	THEM4	Q5T1C6	240 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	FAM72A	Q5TYM5	149 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	MANEAL	Q5VSG8	457 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	FAM72D	Q6L9T8	149 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	CRTC3	Q6UUV7	619 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	ZNF852	Q6ZMS4	543 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	GDPD3	Q7L5L3	318 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	ARC	Q7LC44	396 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	PIWIL3	Q7Z3Z3	882 aa	Known RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	POLN	Q7Z5Q5	900 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	UNC93A	Q86WB7	457 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	FAM72B	Q86X60	149 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	UBE2J2	Q8N2K1	259 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	CELF2-AS1	Q8N7Q2	184 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	AGR3	Q8TD06	166 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	PHOX2B	Q99453	314 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	C11orf84	Q9BUA3	381 aa	Predicted RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	DUSP16	Q9BY84	665 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	GPR61	Q9BZJ8	451 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	ULBP1	Q9BZM6	244 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	C12orf65	Q9H3J6	166 aa	Known RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	ELAC1	Q9H777	363 aa	Known RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	SPATA6	Q9NWH7	488 aa	Predicted RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	ACTR10	Q9NZ32	417 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	NUDT5	Q9UKK9	219 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	SCML1	Q9UN30	329 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	KLHL20	Q9Y2M5	609 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	MTF2	Q9Y483	593 aa	Predicted RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	PCDHB3	Q9Y5E6	796 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	FKBP7	Q9Y680	259 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	E2F8	A0AVK6	867 aa		7.79	□□□□□ -1.16
RTTN-223	ENST00000640931	MFSD2B	A6NFX1	497 aa		7.79	□□□□□ -1.16
RTTN-223	ENST00000640931	SDR42E2	A6NKP2	422 aa		7.79	□□□□□ -1.16
RTTN-223	ENST00000640931	ZNF729	A6NN14	1252 aa	Predicted RBP	7.79	□□□□□ -1.16
RTTN-223	ENST00000640931	DPYSL4	O14531	572 aa		7.79	□□□□□ -1.16
RTTN-223	ENST00000640931	GABRD	O14764	452 aa		7.79	□□□□□ -1.16
RTTN-223	ENST00000640931	STX7	O15400	261 aa	Known RBP	7.79	□□□□□ -1.16
RTTN-223	ENST00000640931	OR2B3	O76000	313 aa		7.79	□□□□□ -1.16
RTTN-223	ENST00000640931	PDE9A	O76083	593 aa		7.79	□□□□□ -1.16
RTTN-223	ENST00000640931	B3GAT3	O94766	335 aa		7.79	□□□□□ -1.16
RTTN-223	ENST00000640931	SORBS2	O94875	1100 aa	Known RBP	7.79	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms