RNA–Protein interactions for RNA: ENST00000637699.1

CLN3-262, Transcript of CLN3, battenin, humanhuman

TSL 2

Gene CLN3, Length 1,228 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-262ENST00000637699 APCP25054 2843 aa18.64■□□□□ 0.57
CLN3-262ENST00000637699 NUP210LQ5VU65 1888 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 A0A1B0GX78 115 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 AP2A1O95782 977 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 FTH1P02794 183 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 EDN3P14138 238 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 ELAVL4P26378 380 aaKnown RBP18.63■□□□□ 0.57
CLN3-262ENST00000637699 NSG1P42857 185 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 TSFMP43897 325 aaKnown RBP18.63■□□□□ 0.57
CLN3-262ENST00000637699 ARSFP54793 590 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 COPS2P61201 443 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 POU6F1Q14863 301 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 NKG7Q16617 165 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 SP5Q6BEB4 398 aaPredicted RBP18.63■□□□□ 0.57
CLN3-262ENST00000637699 KIRREL2Q6UWL6 708 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 C2orf73Q8N5S3 287 aaPredicted RBP18.63■□□□□ 0.57
CLN3-262ENST00000637699 LMNTD1Q8N9Z9 388 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 FKBP10Q96AY3 582 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 PPP1R2P1Q96PQ5 205 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 PHF12Q96QT6 1004 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 SOX17Q9H6I2 414 aaPredicted RBP18.63■□□□□ 0.57
CLN3-262ENST00000637699 PIH1D1Q9NWS0 290 aaKnown RBP18.63■□□□□ 0.57
CLN3-262ENST00000637699 ENTPD4Q9Y227 616 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 HS3ST3B1Q9Y662 390 aa18.63■□□□□ 0.57
CLN3-262ENST00000637699 SLC5A10A0PJK1 596 aa18.62■□□□□ 0.57
CLN3-262ENST00000637699 PIM1P11309 404 aaPredicted RBP18.62■□□□□ 0.57
CLN3-262ENST00000637699 GRIA3P42263 894 aa18.62■□□□□ 0.57
CLN3-262ENST00000637699 GCGRP47871 477 aa18.62■□□□□ 0.57
CLN3-262ENST00000637699 CSE1LP55060 971 aaKnown RBP18.62■□□□□ 0.57
CLN3-262ENST00000637699 NAA30Q147X3 362 aaPredicted RBP18.62■□□□□ 0.57
CLN3-262ENST00000637699 LINC00696Q6ZRV3 163 aa18.62■□□□□ 0.57
CLN3-262ENST00000637699 COG1Q8WTW3 980 aa18.62■□□□□ 0.57
CLN3-262ENST00000637699 STYXQ8WUJ0 223 aa18.62■□□□□ 0.57
CLN3-262ENST00000637699 ALS2CR12Q96Q35 445 aa18.62■□□□□ 0.57
CLN3-262ENST00000637699 SPSB2Q99619 263 aa18.62■□□□□ 0.57
CLN3-262ENST00000637699 OSBPL8Q9BZF1 889 aa18.62■□□□□ 0.57
CLN3-262ENST00000637699 UNKQ9C0B0 810 aaKnown RBP18.62■□□□□ 0.57
CLN3-262ENST00000637699 LHPPQ9H008 270 aa18.62■□□□□ 0.57
CLN3-262ENST00000637699 EPS8L2Q9H6S3 715 aa18.62■□□□□ 0.57
CLN3-262ENST00000637699 WDR54Q9H977 334 aa18.62■□□□□ 0.57
CLN3-262ENST00000637699 IMPACTQ9P2X3 320 aa18.62■□□□□ 0.57
CLN3-262ENST00000637699 CIDEBQ9UHD4 219 aa18.62■□□□□ 0.57
CLN3-262ENST00000637699 OTOGQ6ZRI0 2925 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 OR51F1A6NGY5 319 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 QSOX1O00391 747 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 PJA2O43164 708 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 KDM1AO60341 852 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 ALBP02768 609 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 MCM3P25205 808 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 TLR1Q15399 786 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 RBBP7Q16576 425 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 TUBB8Q3ZCM7 444 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 B3GNTL1Q67FW5 361 aaPredicted RBP18.61■□□□□ 0.57
CLN3-262ENST00000637699 C11orf63Q6NUN7 778 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 COX15Q7KZN9 410 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 FJX1Q86VR8 437 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 METTL27Q8N6F8 245 aaPredicted RBP18.61■□□□□ 0.57
CLN3-262ENST00000637699 CATSPER1Q8NEC5 780 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 THOC3Q96J01 351 aaKnown RBP18.61■□□□□ 0.57
CLN3-262ENST00000637699 CUTCQ9NTM9 273 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.61■□□□□ 0.57
CLN3-262ENST00000637699 CTSFQ9UBX1 484 aa18.61■□□□□ 0.57
CLN3-262ENST00000637699 PRSS44E7EML9 344 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 DSCR3O14972 297 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 OR56A5P0C7T3 313 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 POU3F2P20265 443 aaPredicted RBP18.6■□□□□ 0.57
CLN3-262ENST00000637699 MSNP26038 577 aaKnown RBP18.6■□□□□ 0.57
CLN3-262ENST00000637699 PKLRP30613 574 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 PLOD1Q02809 727 aaPredicted RBP18.6■□□□□ 0.57
CLN3-262ENST00000637699 ITIH4Q14624 930 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 KCTD11Q693B1 232 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 FAM180AQ6UWF9 173 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 ARHGEF18Q6ZSZ5 1173 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 TAX1BP1Q86VP1 789 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 CNGA4Q8IV77 575 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 KLHDC8BQ8IXV7 354 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 LINC01555Q8NAE3 123 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 DENND1AQ8TEH3 1009 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 MOCOSQ96EN8 888 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 SLC26A1Q9H2B4 701 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 MRM3Q9HC36 420 aaKnown RBP18.6■□□□□ 0.57
CLN3-262ENST00000637699 EFR3BQ9Y2G0 817 aa18.6■□□□□ 0.57
CLN3-262ENST00000637699 AKR1B15C9JRZ8 316 aaPredicted RBP18.59■□□□□ 0.57
CLN3-262ENST00000637699 OR1I1O60431 355 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 KLHL18O94889 574 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 ONECUT2O95948 504 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 CTNNA1P35221 906 aaKnown RBP18.59■□□□□ 0.57
CLN3-262ENST00000637699 OR1D4P47884 311 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 RAB28P51157 221 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 Q0VFX4 171 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 PARP6Q2NL67 630 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 AADACL2Q6P093 401 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 ISLR2Q6UXK2 745 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 PACS1Q6VY07 963 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 DTWD1Q8N5C7 304 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 OR11G2Q8NGC1 345 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 CFAP61Q8NHU2 1237 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 IL17FQ96PD4 163 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 MESP1Q9BRJ9 268 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 OLAHQ9NV23 265 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms