RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 LIPJQ5W064 366 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 CAPRIN2Q6IMN6 1127 aaKnown RBP7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 CAPN13Q6MZZ7 669 aaPredicted RBP7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 LETMD1Q6P1Q0 360 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 LPCAT2Q7L5N7 544 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 THOC6Q86W42 341 aaKnown RBP7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 DDIASQ8IXT1 998 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 CPSF7Q8N684 471 aaKnown RBP7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 CDYL2Q8N8U2 506 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 OR4F6Q8NGB9 312 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 OR52B6Q8NGF0 335 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 METTL6Q8TCB7 284 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 RLN3Q8WXF3 142 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 SNX19Q92543 992 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 MED8Q96G25 268 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 PPP1R36Q96LQ0 422 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 OR52B2Q96RD2 323 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 RAB11FIP5Q9BXF6 653 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 WDR55Q9H6Y2 383 aaPredicted RBP7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 MVB12BQ9H7P6 319 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 ACTR8Q9H981 624 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 EBF2Q9HAK2 575 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 TM7SF3Q9NS93 570 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 RIC8BQ9NVN3 520 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 TRNAU1APQ9NX07 287 aaKnown RBP7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 GPRC5BQ9NZH0 403 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 SPATA7Q9P0W8 599 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 POLG2Q9UHN1 485 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 LNPEPQ9UIQ6 1025 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 ZNF225Q9UK10 706 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 KCNK6Q9Y257 313 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 HEBP2Q9Y5Z4 205 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 DGKBQ9Y6T7 804 aa7.33□□□□□ -1.24
PTP4A1-206ENST00000627002 CCDC163A0A0D9SF12 145 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 A0A1B0GTL3 188 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 PDZK1P1A8MUH7 402 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 MEI4A8MW99 385 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 CAPN14A8MX76 684 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 E9PBE3 544 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 H0Y8X5 98 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 UBDO15205 165 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 PI15O43692 258 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 KLHL41O60662 606 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 UNC5CO95185 931 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 KRT6AP02538 564 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 KRT6BP04259 564 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 CAPN1P07384 714 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 DCNP07585 359 aaKnown RBP7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 THEGLP0DJG4 465 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 CALB2P22676 271 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 ITPKAP23677 461 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 NDUFS1P28331 727 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 PRDX6P30041 224 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 PRDX3P30048 256 aaKnown RBP7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 SCTRP47872 440 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 KRT6CP48668 564 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 ATP4BP51164 291 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 MNAT1P51948 309 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 PNLIPRP1P54315 467 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 FOXA1P55317 472 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 ZNF33BQ06732 778 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 SIGLEC14Q08ET2 396 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 KRT33BQ14525 404 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 ALG11Q2TAA5 492 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 PROX2Q3B8N5 592 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 UAP1L1Q3KQV9 507 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 CCSMST1Q4G0I0 132 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 GLIPR1L2Q4G1C9 344 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 XKR7Q5GH72 579 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 WASH2PQ6VEQ5 465 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 LARP4Q71RC2 724 aaKnown RBP eCLIP7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 SPATA19Q7Z5L4 167 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 IQCHQ86VS3 1027 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 SYTL1Q8IYJ3 562 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 RGL4Q8IZJ4 473 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 L3MBTL4Q8NA19 623 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 OR13H1Q8NG92 308 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 OR5AR1Q8NGP9 310 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 SETD7Q8WTS6 366 aaKnown RBP7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 ZNF480Q8WV37 535 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 PYCR2Q96C36 320 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 CMTM5Q96DZ9 223 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 KLHDC7BQ96G42 594 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 PDXPQ96GD0 296 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 NSL1Q96IY1 281 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 C12orf66Q96MD2 445 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 KCNA7Q96RP8 456 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 MIPEPQ99797 713 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 CCDC106Q9BWC9 280 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 SGPP1Q9BX95 441 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 PCBD2Q9H0N5 130 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 ATG10Q9H0Y0 220 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 IRF2BPLQ9H1B7 796 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 MRPL40Q9NQ50 206 aaKnown RBP7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 WASH6PQ9NQA3 447 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 CCDC177Q9NQR7 707 aaPredicted RBP7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 AASDHPPTQ9NRN7 309 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 GPR27Q9NS67 375 aa7.32□□□□□ -1.24
PTP4A1-206ENST00000627002 TAGLN3Q9UI15 199 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms