RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 ITIH1P19827 911 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 CCNA2P20248 432 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 AOAHP28039 575 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 SERPINA4P29622 427 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 EPHB3P54753 998 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 PLIN5Q00G26 463 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 CD47Q08722 323 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 LMAN2Q12907 356 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 MTAPQ13126 283 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 SP140Q13342 867 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 GTDC1Q4AE62 458 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 SGO1Q5FBB7 561 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 FGD3Q5JSP0 725 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZNF691Q5VV52 312 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZDHHC20Q5W0Z9 365 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 LAIR2Q6ISS4 152 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 HTR3DQ70Z44 454 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 DET1Q7L5Y6 550 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 R3HCC1LQ7Z5L2 792 aaKnown RBP9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 TMEM179BQ7Z7N9 219 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZSWIM9Q86XI8 627 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 DCP2Q8IU60 420 aaKnown RBP9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 ADGRG2Q8IZP9 1017 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 CPA6Q8N4T0 437 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 FIBINQ8TAL6 211 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 NETO1Q8TDF5 533 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 ECHDC3Q96DC8 303 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 REXO5Q96IC2 774 aaKnown RBP9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 LMLNQ96KR4 655 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 MCCC1Q96RQ3 725 aaPredicted RBP9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 BCL7BQ9BQE9 202 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 DCUN1D5Q9BTE7 237 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 LHPPQ9H008 270 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZFP14Q9HCL3 533 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 HMX1Q9NP08 348 aaPredicted RBP9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 TBC1D23Q9NUY8 699 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 KIAA1522Q9P206 1035 aaPredicted RBP9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 TMEFF2Q9UIK5 374 aaPredicted RBP9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 LSM7Q9UK45 103 aaKnown RBP9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 PSME2Q9UL46 239 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 PDE10AQ9Y233 779 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 DLGAP4Q9Y2H0 992 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 PCDHB14Q9Y5E9 798 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 PCDHGA8Q9Y5G5 932 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 CPQQ9Y646 472 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 TET1Q8NFU7 2136 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 PIKFYVEQ9Y2I7 2098 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 LOC100130705A0A1B0GUX0 176 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 NPIPB15A6NHN6 443 aaPredicted RBP9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 M0QX08 132 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 GNGT2O14610 69 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 PER2O15055 1255 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 PFDN1O60925 122 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 PARNO95453 639 aaKnown RBP9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 SERPINA1P01009 418 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 SEMG1P04279 462 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 INHAP05111 366 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 HTR1AP08908 422 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 OR56A5P0C7T3 313 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 IL7RP16871 459 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZNF12P17014 697 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 CD247P20963 164 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 EEF1B2P24534 225 aaKnown RBP9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 CCR7P32248 378 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 RPIAP49247 311 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 HNMTP50135 292 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 IST1P53990 364 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 RAD23AP54725 363 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 C21orf58P58505 322 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 ISL1P61371 349 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 SNRPD1P62314 119 aaKnown RBP9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 SLC7A9P82251 487 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 B4GALNT1Q00973 533 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 ABRQ12979 859 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 ARHGEF7Q14155 803 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 C16orf72Q14CZ0 275 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 ACOX1Q15067 660 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 CTU2Q2VPK5 515 aaKnown RBP9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 PLEKHG6Q3KR16 790 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 DGKKQ5KSL6 1271 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 PLEKHS1Q5SXH7 462 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 SHQ1Q6PI26 577 aaKnown RBP9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 SPESP1Q6UW49 350 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 GCNT7Q6ZNI0 430 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 NEK10Q6ZWH5 1172 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 UBE2R2Q712K3 238 aaPredicted RBP9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 CHST15Q7LFX5 561 aaPredicted RBP9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 TSPAN33Q86UF1 283 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 KLHDC8AQ8IYD2 350 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 PHACTR4Q8IZ21 702 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 SLC39A11Q8N1S5 342 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 ARL10Q8N8L6 244 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 ARL14EPQ8N8R7 260 aaPredicted RBP9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 SMYD1Q8NB12 490 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 OR2AP1Q8NGE2 309 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 OR6K2Q8NGY2 324 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 MIPOL1Q8TD10 442 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 TRUB1Q8WWH5 349 aaKnown RBP9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 SELENOMQ8WWX9 145 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 NELL1Q92832 810 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms