RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 SPDYE7PQ495Y7 208 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 SPANXN4Q5MJ08 99 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 KCTD11Q693B1 232 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 GPRIN3Q6ZVF9 776 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 SYVN1Q86TM6 617 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 STAG3L4Q8TBR4 150 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 ZNF583Q96ND8 569 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 RDH12Q96NR8 316 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 ATP13A2Q9NQ11 1180 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 PRMT7Q9NVM4 692 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 TNFSF13BQ9Y275 285 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 FAM240BA0A1B0GVZ2 78 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 CIB4A0PJX0 185 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 CXCL11O14625 94 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 TLR5O60602 858 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 MATN4O95460 622 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 HTR6P50406 440 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 ZMYND11Q15326 602 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 TAF12Q16514 161 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 RUNDC3AQ59EK9 446 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 XRRA1Q6P2D8 792 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 VTCN1Q7Z7D3 282 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 NLRP8Q86W28 1048 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 GPRC5AQ8NFJ5 357 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 OR52B6Q8NGF0 335 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 SPPL2AQ8TCT8 520 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 SLC7A6Q92536 515 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 DNASE1L2Q92874 299 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 PCYT2Q99447 389 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 APOL5Q9BWW9 433 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 SMPD4Q9NXE4 827 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 RCOR3Q9P2K3 495 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 RBPJLQ9UBG7 517 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 HCN4Q9Y3Q4 1203 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 HMX3A6NHT5 357 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 VPS4BO75351 444 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 NDUFS3O75489 264 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 ARHGEF15O94989 841 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 CYP2A6P11509 494 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 CD6P30203 668 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 GRK5P34947 590 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 TIE1P35590 1138 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 GJA5P36382 358 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 CRISP3P54108 245 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 SEMA3AQ14563 771 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 LAIR1Q6GTX8 287 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 GLCCI1Q86VQ1 547 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 SLC13A3Q8WWT9 602 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 MYDGFQ969H8 173 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 ULK4Q96C45 1275 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 COQ8BQ96D53 544 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 ASB2Q96Q27 587 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 IKZF5Q9H5V7 419 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 EVA1BQ9NVM1 165 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 ING3Q9NXR8 418 aa9.56□□□□□ -0.88
TNFAIP3-210ENST00000620204 FABP12A6NFH5 140 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 DSCR3O14972 297 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 AP2A2O94973 939 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 DNAJB1P25685 340 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 MCCD1P59942 119 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 POU4F3Q15319 338 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 BAK1Q16611 211 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 GNASQ5JWF2 1037 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 PRAMEF19Q5SWL8 479 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 ZNF57Q68EA5 555 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 PRSS48Q7RTY5 328 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 GALNT7Q86SF2 657 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 KRTCAP2Q8N6L1 136 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 OR56A4Q8NGH8 313 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 WDR36Q8NI36 951 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 FAM167AQ96KS9 214 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 NIFKQ9BYG3 293 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 PPIL3Q9H2H8 161 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 DUSP21Q9H596 190 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 ZNF639Q9UID6 485 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 ZNF222Q9UK12 451 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 SOWAHBA6NEL2 793 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 CPSF4O95639 269 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 HLA-DQB2P05538 268 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 POLR2CP19387 275 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 DDCP20711 480 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 ATN1P54259 1190 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 UGT2B15P54855 530 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 CASP9P55211 416 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 RAD51Q06609 339 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 ST3GAL4Q11206 333 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 FAPQ12884 760 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 PWP1Q13610 501 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 MAD2L1BPQ15013 274 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 FXNQ16595 210 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 FLYWCH1Q4VC44 716 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 CARD16Q5EG05 197 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 TRIQKQ629K1 86 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 OR2T11Q8NH01 316 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 BRSK1Q8TDC3 778 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 CENPIQ92674 756 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 COLEC11Q9BWP8 271 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 SLC22A4Q9H015 551 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 ABI2Q9NYB9 513 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 CACNG4Q9UBN1 327 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms