RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 CFAP36Q96G28 342 aa24.04■■□□□ 1.44
PMS1-220ENST00000618056 EFHD1Q9BUP0 239 aa24.04■■□□□ 1.44
PMS1-220ENST00000618056 SLC39A10Q9ULF5 831 aa24.04■■□□□ 1.44
PMS1-220ENST00000618056 LOC101059948A0A1B0GTJ6 334 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 ISM1B1AKI9 464 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 PSIP1O75475 530 aaKnown RBP24.03■■□□□ 1.44
PMS1-220ENST00000618056 GABRB3P28472 473 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 BDKRB1P46663 353 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 PDIA2Q13087 525 aaKnown RBP24.03■■□□□ 1.44
PMS1-220ENST00000618056 CCSMST1Q4G0I0 132 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 TEDDM1Q5T9Z0 273 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 TRIM73Q86UV7 250 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 HMGCLL1Q8TB92 370 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 CD200R1Q8TD46 325 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 INPP5DQ92835 1189 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 TCTN2Q96GX1 697 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 IL17FQ96PD4 163 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 GPR21Q99679 349 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 GPN2Q9H9Y4 310 aaPredicted RBP24.03■■□□□ 1.44
PMS1-220ENST00000618056 CIDEBQ9UHD4 219 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 CDC23Q9UJX2 597 aa24.03■■□□□ 1.44
PMS1-220ENST00000618056 FER1L5A0AVI2 2057 aa24.02■■□□□ 1.44
PMS1-220ENST00000618056 ERVH48-1M5A8F1 160 aa24.02■■□□□ 1.44
PMS1-220ENST00000618056 EIF3FO00303 357 aaPredicted RBP24.02■■□□□ 1.44
PMS1-220ENST00000618056 VPS26AO75436 327 aa24.02■■□□□ 1.44
PMS1-220ENST00000618056 AHSGP02765 367 aa24.02■■□□□ 1.44
PMS1-220ENST00000618056 ENO3P13929 434 aaPredicted RBP24.02■■□□□ 1.44
PMS1-220ENST00000618056 CARSP49589 748 aaKnown RBP24.02■■□□□ 1.44
PMS1-220ENST00000618056 CKAP4Q07065 602 aaKnown RBP24.02■■□□□ 1.44
PMS1-220ENST00000618056 RAB42Q8N4Z0 105 aa24.02■■□□□ 1.44
PMS1-220ENST00000618056 LSM14AQ8ND56 463 aaKnown RBP24.02■■□□□ 1.44
PMS1-220ENST00000618056 SLC45A3Q96JT2 553 aa24.02■■□□□ 1.44
PMS1-220ENST00000618056 KLHL25Q9H0H3 589 aa24.02■■□□□ 1.44
PMS1-220ENST00000618056 DPH5Q9H2P9 285 aa24.02■■□□□ 1.44
PMS1-220ENST00000618056 SPATA7Q9P0W8 599 aa24.02■■□□□ 1.44
PMS1-220ENST00000618056 FKBP9O95302 570 aa24.01■■□□□ 1.43
PMS1-220ENST00000618056 CBSLP0DN79 551 aa24.01■■□□□ 1.43
PMS1-220ENST00000618056 CBSP35520 551 aa24.01■■□□□ 1.43
PMS1-220ENST00000618056 TRMT10BQ6PF06 316 aaKnown RBP24.01■■□□□ 1.43
PMS1-220ENST00000618056 CDHR3Q6ZTQ4 885 aa24.01■■□□□ 1.43
PMS1-220ENST00000618056 ANKMY2Q8IV38 441 aa24.01■■□□□ 1.43
PMS1-220ENST00000618056 FBXO36Q8NEA4 188 aa24.01■■□□□ 1.43
PMS1-220ENST00000618056 TTC9Q92623 222 aa24.01■■□□□ 1.43
PMS1-220ENST00000618056 SLC12A9Q9BXP2 914 aa24.01■■□□□ 1.43
PMS1-220ENST00000618056 PPANQ9NQ55 473 aaKnown RBP24.01■■□□□ 1.43
PMS1-220ENST00000618056 GRHL1Q9NZI5 618 aa24.01■■□□□ 1.43
PMS1-220ENST00000618056 PADI1Q9ULC6 663 aa24.01■■□□□ 1.43
PMS1-220ENST00000618056 UTP11Q9Y3A2 253 aaKnown RBP24.01■■□□□ 1.43
PMS1-220ENST00000618056 PCDHB3Q9Y5E6 796 aa24.01■■□□□ 1.43
PMS1-220ENST00000618056 ARHGEF33A8MVX0 844 aa24■■□□□ 1.43
PMS1-220ENST00000618056 TMEM150CB9EJG8 249 aa24■■□□□ 1.43
PMS1-220ENST00000618056 ATXN7O15265 892 aaPredicted RBP24■■□□□ 1.43
PMS1-220ENST00000618056 CPNE3O75131 537 aaKnown RBP24■■□□□ 1.43
PMS1-220ENST00000618056 SCRG1O75711 98 aa24■■□□□ 1.43
PMS1-220ENST00000618056 CCNYL3P0C7X3 344 aa24■■□□□ 1.43
PMS1-220ENST00000618056 MPC1LP0DKB6 136 aa24■■□□□ 1.43
PMS1-220ENST00000618056 TIAL1Q01085 375 aaKnown RBP eCLIP24■■□□□ 1.433e-9■■■■■ 32.4
PMS1-220ENST00000618056 CUL1Q13616 776 aa24■■□□□ 1.43
PMS1-220ENST00000618056 FASTKD3Q14CZ7 662 aaKnown RBP24■■□□□ 1.43
PMS1-220ENST00000618056 ZIC1Q15915 447 aa24■■□□□ 1.43
PMS1-220ENST00000618056 SOWAHCQ53LP3 525 aaPredicted RBP24■■□□□ 1.43
PMS1-220ENST00000618056 KIAA1614Q5VZ46 1190 aa24■■□□□ 1.43
PMS1-220ENST00000618056 UGT3A1Q6NUS8 523 aa24■■□□□ 1.43
PMS1-220ENST00000618056 TMEM126BQ8IUX1 230 aa24■■□□□ 1.43
PMS1-220ENST00000618056 DENND1AQ8TEH3 1009 aa24■■□□□ 1.43
PMS1-220ENST00000618056 WBP1Q96G27 269 aa24■■□□□ 1.43
PMS1-220ENST00000618056 BBC3Q96PG8 261 aaPredicted RBP24■■□□□ 1.43
PMS1-220ENST00000618056 FAM114A2Q9NRY5 505 aa24■■□□□ 1.43
PMS1-220ENST00000618056 TSR3Q9UJK0 312 aaKnown RBP24■■□□□ 1.43
PMS1-220ENST00000618056 COL6A6A6NMZ7 2263 aa24■■□□□ 1.43
PMS1-220ENST00000618056 MYO1CO00159 1063 aa24■■□□□ 1.43
PMS1-220ENST00000618056 PRICKLE3O43900 615 aaPredicted RBP24■■□□□ 1.43
PMS1-220ENST00000618056 CATP04040 527 aaKnown RBP24■■□□□ 1.43
PMS1-220ENST00000618056 ERGP11308 486 aa24■■□□□ 1.43
PMS1-220ENST00000618056 SKIV2L2P42285 1042 aaKnown RBP24■■□□□ 1.43
PMS1-220ENST00000618056 CYP2A13Q16696 494 aa24■■□□□ 1.43
PMS1-220ENST00000618056 EEF1AKMT2Q5JPI9 291 aaKnown RBP24■■□□□ 1.43
PMS1-220ENST00000618056 FBXO15Q8NCQ5 510 aaPredicted RBP24■■□□□ 1.43
PMS1-220ENST00000618056 OR9A1PQ8NGU1 263 aa24■■□□□ 1.43
PMS1-220ENST00000618056 OR1L3Q8NH93 324 aa24■■□□□ 1.43
PMS1-220ENST00000618056 RNF31Q96EP0 1072 aa24■■□□□ 1.43
PMS1-220ENST00000618056 LRFN5Q96NI6 719 aa24■■□□□ 1.43
PMS1-220ENST00000618056 RAB17Q9H0T7 212 aa24■■□□□ 1.43
PMS1-220ENST00000618056 FAM60AQ9NP50 221 aa24■■□□□ 1.43
PMS1-220ENST00000618056 LHX9Q9NQ69 397 aa24■■□□□ 1.43
PMS1-220ENST00000618056 TAS2R13Q9NYV9 303 aa24■■□□□ 1.43
PMS1-220ENST00000618056 MOCS1Q9NZB8 636 aa24■■□□□ 1.43
PMS1-220ENST00000618056 SERTAD3Q9UJW9 196 aa24■■□□□ 1.43
PMS1-220ENST00000618056 CORO1CQ9ULV4 474 aaPredicted RBP24■■□□□ 1.43
PMS1-220ENST00000618056 TERTO14746 1132 aaKnown RBP23.99■■□□□ 1.43
PMS1-220ENST00000618056 EIF3HO15372 352 aaKnown RBP eCLIP23.99■■□□□ 1.43
PMS1-220ENST00000618056 NTRK1P04629 796 aa23.99■■□□□ 1.43
PMS1-220ENST00000618056 GABRA4P48169 554 aa23.99■■□□□ 1.43
PMS1-220ENST00000618056 LRRC8EQ6NSJ5 796 aa23.99■■□□□ 1.43
PMS1-220ENST00000618056 CYHR1Q6ZMK1 362 aa23.99■■□□□ 1.43
PMS1-220ENST00000618056 ZBED8Q8IZ13 594 aa23.99■■□□□ 1.43
PMS1-220ENST00000618056 C2orf73Q8N5S3 287 aaPredicted RBP23.99■■□□□ 1.43
PMS1-220ENST00000618056 LMNTD1Q8N9Z9 388 aa23.99■■□□□ 1.43
PMS1-220ENST00000618056 ASB11Q8WXH4 323 aa23.99■■□□□ 1.43
PMS1-220ENST00000618056 NDNQ99608 321 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms