RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 CDH12P55289 794 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 C1DQ13901 141 aaKnown RBP15.3■□□□□ 0.04
SYNRG-223ENST00000616179 C18orf21Q32NC0 220 aaPredicted RBP15.3■□□□□ 0.04
SYNRG-223ENST00000616179 RUNDC3AQ59EK9 446 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 GLT6D1Q7Z4J2 308 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 BPHLQ86WA6 291 aaPredicted RBP15.3■□□□□ 0.04
SYNRG-223ENST00000616179 BEND7Q8N7W2 519 aaPredicted RBP15.3■□□□□ 0.04
SYNRG-223ENST00000616179 SLC43A3Q8NBI5 491 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 PROKR1Q8TCW9 393 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 GPR151Q8TDV0 419 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 SELENOMQ8WWX9 145 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 SH3BP4Q9P0V3 963 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 SSR3Q9UNL2 185 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 METTL15A6NJ78 407 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 IQCF5A8MTL0 148 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 CAPNS1P04632 268 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 SLC10A3P09131 477 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 SLC10A7Q0GE19 358 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 ARHGEF6Q15052 776 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 RFTN2Q52LD8 501 aaPredicted RBP15.3■□□□□ 0.04
SYNRG-223ENST00000616179 KRT74Q7RTS7 529 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 PRSS48Q7RTY5 328 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 RAD18Q9NS91 495 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 ZFC3H1O60293 1989 aaKnown RBP15.3■□□□□ 0.04
SYNRG-223ENST00000616179 TOGARAM1Q9Y4F4 1720 aa15.3■□□□□ 0.04
SYNRG-223ENST00000616179 ZNF487B1APH4 448 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 AKR7A2O43488 359 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 CCNCP24863 283 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 GPAT3Q53EU6 434 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 GRAMD2AQ8IUY3 354 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 NLGN4XQ8N0W4 816 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 LRRC17Q8N6Y2 441 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 YIPF7Q8N8F6 280 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 FCGR1BQ92637 280 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 PPIL3Q9H2H8 161 aaKnown RBP15.29■□□□□ 0.04
SYNRG-223ENST00000616179 ZNF214Q9UL59 606 aaPredicted RBP15.29■□□□□ 0.04
SYNRG-223ENST00000616179 ING4Q9UNL4 249 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 MRPS7Q9Y2R9 242 aaKnown RBP15.29■□□□□ 0.04
SYNRG-223ENST00000616179 CASTOR2A6NHX0 329 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 TNFRSF11BO00300 401 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 DNAJA1P31689 397 aaKnown RBP15.29■□□□□ 0.04
SYNRG-223ENST00000616179 NKX3-2P78367 333 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 KCNC4Q03721 635 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 SEMA3AQ14563 771 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 KANK2Q63ZY3 851 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 ZFAND4Q86XD8 727 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 OR6F1Q8NGZ6 308 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 PPP1R2P1Q96PQ5 205 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 GPR20Q99678 358 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 SPASTQ9UBP0 616 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 MYBPHLA2RUH7 354 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 A8MX80 341 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 CDRT1O95170 752 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 S1PR4O95977 384 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 GNPDA1P46926 289 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 PTPN5P54829 565 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 CDC20Q12834 499 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 TARBP2Q15633 366 aaKnown RBP15.29■□□□□ 0.04
SYNRG-223ENST00000616179 TAF12Q16514 161 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 UGT8Q16880 541 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 UAP1L1Q3KQV9 507 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 OR6C4Q8NGE1 309 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 ZNF300Q96RE9 604 aaPredicted RBP15.29■□□□□ 0.04
SYNRG-223ENST00000616179 SPRTNQ9H040 489 aaPredicted RBP15.29■□□□□ 0.04
SYNRG-223ENST00000616179 FAM83DQ9H4H8 585 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 SMURF1Q9HCE7 757 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 SMPD4Q9NXE4 827 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 NLKQ9UBE8 527 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 RPS6KA6Q9UK32 745 aa15.29■□□□□ 0.04
SYNRG-223ENST00000616179 C2orf81A6NN90 581 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 IFRD1O00458 451 aaPredicted RBP15.28■□□□□ 0.04
SYNRG-223ENST00000616179 ARCN1P48444 511 aaKnown RBP15.28■□□□□ 0.04
SYNRG-223ENST00000616179 CDC42P60953 191 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 GALK2Q01415 458 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 NPRL3Q12980 569 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 CAMK2GQ13555 558 aaPredicted RBP15.28■□□□□ 0.04
SYNRG-223ENST00000616179 ASB18Q6ZVZ8 466 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 LACC1Q8IV20 430 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 PIH1D2Q8WWB5 315 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 MRGPRX2Q96LB1 330 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 APOLD1Q96LR9 279 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 LRTM1Q9HBL6 345 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 ANKHQ9HCJ1 492 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 J3KR12 359 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 SLC7A4O43246 635 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 ARIH2O95376 493 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 PRKAR1AP10644 381 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 CRATP43155 626 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 DAOAP59103 153 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 EFEMP1Q12805 493 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 MAD2L1BPQ15013 274 aaPredicted RBP15.28■□□□□ 0.04
SYNRG-223ENST00000616179 TMEM207Q6UWW9 146 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 CLEC20AQ6ZU45 233 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 NKAPQ8N5F7 415 aaKnown RBP15.28■□□□□ 0.04
SYNRG-223ENST00000616179 SLC37A3Q8NCC5 494 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 IL17RDQ8NFM7 739 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 AKAP1Q92667 903 aaKnown RBP eCLIP15.28■□□□□ 0.04
SYNRG-223ENST00000616179 CBLP22681 906 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 RORCP51449 518 aa15.28■□□□□ 0.04
SYNRG-223ENST00000616179 NCF4Q15080 339 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms