RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 FAM159BA6NKW6 160 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 RHPN2P1A8MT19 583 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 SCAMP3O14828 347 aaKnown RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 PCDH7O60245 1069 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 GRSF1Q12849 480 aaKnown RBP eCLIP4.48□□□□□ -1.69
CHD9-221ENST00000615216 TRAM1Q15629 374 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ABCA11PQ4W5N1 156 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 VWA5B1Q5TIE3 1220 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 RNF220Q5VTB9 566 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 NIPAL1Q6NVV3 410 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ULK3Q6PHR2 472 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 PARGQ86W56 976 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 OR5T3Q8NGG3 340 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 OR52J3Q8NH60 311 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 EZH1Q92800 747 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 LRRC58Q96CX6 371 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 TBATAQ96M53 351 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 NTPCRQ9BSD7 190 aaKnown RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 DMAC2Q9NW81 257 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 FBXO9Q9UK97 447 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 FBXW2Q9UKT8 454 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 TESMINQ9Y4I5 508 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 TIMM22Q9Y584 194 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 DAPL1A0PJW8 107 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 H0YJX3 145 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 hCG_2039718K7EN88 272 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 FFAR2O15552 330 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 LGR5O75473 907 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ZNF432O94892 652 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 MAPK3P27361 379 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 SLC6A4P31645 630 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 CCKBRP32239 447 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 SMSP52788 366 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 TAS2R43P59537 309 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 SMU1Q2TAY7 513 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 PDCD4Q53EL6 469 aaKnown RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 PGBD2Q6P3X8 592 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ZNF227Q86WZ6 799 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 SDR16C5Q8N3Y7 309 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 FSTL5Q8N475 847 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 OR14C36Q8NHC7 312 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ACDQ96AP0 544 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 MOAP1Q96BY2 351 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 CEP295NLQ96MC4 621 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 EPYCQ99645 322 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ABCG4Q9H172 646 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 TNKS2Q9H2K2 1166 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 POPDC3Q9HBV1 291 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 NEUROD4Q9HD90 331 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 MED31Q9Y3C7 131 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 FABP12A6NFH5 140 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TREHO43280 583 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 OR4F21O95013 312 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 CD48P09326 243 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 NELFEP18615 380 aaKnown RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 DNAJB13P59910 316 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 C1QTNF8P60827 252 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 SLC13A2Q13183 592 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 DAG1Q14118 895 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 IDNKQ5T6J7 187 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 RNF19BQ6ZMZ0 732 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 SIX5Q8N196 739 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 CLEC4DQ8WXI8 215 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 OSTF1Q92882 214 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ART5Q96L15 291 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 HIST1H2AAQ96QV6 131 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ACAT2Q9BWD1 397 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TRIM36Q9NQ86 728 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 SCML2Q9UQR0 700 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ARL5AQ9Y689 179 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 C10orf71Q711Q0 1435 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ARPC2O15144 300 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 SEPT4O43236 478 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 C8BP07358 591 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 IL7RP16871 459 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 GRIA2P42262 883 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 APLP1P51693 650 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ARF5P84085 180 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TARDBPQ13148 414 aaKnown RBP eCLIP4.47□□□□□ -1.693e-8■■■■■ 36.6
CHD9-221ENST00000615216 KCNC3Q14003 757 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 SIM2Q14190 667 aaPredicted RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 ZMYND11Q15326 602 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TMEM220Q6QAJ8 160 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 FAM124AQ86V42 546 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 CHST4Q8NCG5 386 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 AIFM2Q9BRQ8 373 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 SLC39A3Q9BRY0 314 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 EFCAB11Q9BUY7 163 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 GATA5Q9BWX5 397 aaPredicted RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 FGFBP2Q9BYJ0 223 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 GPR88Q9GZN0 384 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 POLR2J3Q9H1A7 115 aaKnown RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 COQ10BQ9H8M1 238 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 PCDHGB6Q9Y5F9 930 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ATRNL1Q5VV63 1379 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 EDDM13A0A1B0GTR0 161 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 RB1P06400 928 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 LINGO3P0C6S8 592 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ECHS1P30084 290 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms