RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 AFTPHQ6ULP2 937 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 GOLGA7Q7Z5G4 137 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 MMAAQ8IVH4 418 aaKnown RBP11.52□□□□□ -0.57
CDH5-208ENST00000614547 MYDGFQ969H8 173 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 MUL1Q969V5 352 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 FUBP1Q96AE4 644 aaKnown RBP11.52□□□□□ -0.57
CDH5-208ENST00000614547 L3HYPDHQ96EM0 354 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 MMP28Q9H239 520 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 GPR83Q9NYM4 423 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 ABCD2Q9UBJ2 740 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 UBA2Q9UBT2 640 aaPredicted RBP11.52□□□□□ -0.57
CDH5-208ENST00000614547 SARDHQ9UL12 918 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 ST3GAL5Q9UNP4 418 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 A0A0C4DFX4 3053 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 ANKRD34BA5PLL1 514 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 UPK1BO75841 260 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 SLC25A14O95258 325 aaPredicted RBP11.52□□□□□ -0.57
CDH5-208ENST00000614547 RPLP0P05388 317 aaKnown RBP11.52□□□□□ -0.57
CDH5-208ENST00000614547 RHOCP08134 193 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 LPOP22079 712 aaPredicted RBP11.52□□□□□ -0.57
CDH5-208ENST00000614547 GANABQ14697 944 aaKnown RBP11.52□□□□□ -0.57
CDH5-208ENST00000614547 USP39Q53GS9 565 aaKnown RBP11.52□□□□□ -0.57
CDH5-208ENST00000614547 CACTIN-AS1Q8N1I8 211 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 DTX3Q8N9I9 347 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 KCTD13Q8WZ19 329 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 PYURFQ96I23 114 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 PHOX2BQ99453 314 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 INPP5KQ9BT40 448 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 TTPALQ9BTX7 342 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 FAM126AQ9BYI3 521 aaPredicted RBP11.52□□□□□ -0.57
CDH5-208ENST00000614547 SP140LQ9H930 580 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 CARS2Q9HA77 564 aaKnown RBP11.52□□□□□ -0.57
CDH5-208ENST00000614547 NTN4Q9HB63 628 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 DYRK4Q9NR20 520 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 TMLHEQ9NVH6 421 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 GPSM3Q9Y4H4 160 aa11.52□□□□□ -0.57
CDH5-208ENST00000614547 A0A0D9SEW6 157 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 C17orf102A2RUQ5 167 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 SAGE2PA6NJ88 616 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 LOC730098B7Z3J9 87 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 NUAK1O60285 661 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 PSIP1O75475 530 aaKnown RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 AP2A2O94973 939 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 CKMT1AP12532 417 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 THPOP40225 353 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 PGFP49763 221 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 ELP6Q0PNE2 266 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 NKG7Q16617 165 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 RUNDC3AQ59EK9 446 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 FBXL22Q6P050 247 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 CYHR1Q6ZMK1 362 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 ZNF517Q6ZMY9 492 aaPredicted RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 EIF3MQ7L2H7 374 aaKnown RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 CCDC117Q8IWD4 279 aaPredicted RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 CADM2Q8N3J6 435 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 PPTC7Q8NI37 304 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 BRSK1Q8TDC3 778 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 MED8Q96G25 268 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 ZNF419Q96HQ0 510 aaPredicted RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 IKZF5Q9H5V7 419 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 CCNB1IP1Q9NPC3 277 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 TLR8Q9NR97 1041 aaKnown RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 AASDHPPTQ9NRN7 309 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 POLR3BQ9NW08 1133 aaPredicted RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 UCKL1Q9NWZ5 548 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 RHCGQ9UBD6 479 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 B3GNT3Q9Y2A9 372 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 A0A1W2PQ72 361 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 TBKBP1A7MCY6 615 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 F8W810 466 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 APOL3O95236 402 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 MATN4O95460 622 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 MMP3P08254 477 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 C7P10643 843 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 ATN1P54259 1190 aaPredicted RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 CREMQ03060 361 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 RNASE12Q5GAN4 147 aaKnown RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 ZNF544Q6NX49 715 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 CARNMT1Q8N4J0 409 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 AADATQ8N5Z0 425 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 C19orf18Q8NEA5 215 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 RHOXF1Q8NHV9 184 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 BRI3BPQ8WY22 251 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 ZNF583Q96ND8 569 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 C11orf16Q9NQ32 467 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 THUMPD1Q9NXG2 353 aaKnown RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 ABCG2Q9UNQ0 655 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 PTCH2Q9Y6C5 1203 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 GABRDO14764 452 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 FPGTO14772 594 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 TLL1O43897 1013 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 CPNE6O95741 557 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 NDST3O95803 873 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 MTHFD2P13995 350 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 XPAP23025 273 aaPredicted RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 EDNRBP24530 442 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 RHOAP61586 193 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 SF1Q15637 639 aaKnown RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 BRMS1LQ5PSV4 323 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 ERAP2Q6P179 960 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms