RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 MCOLN3Q8TDD5 553 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 EXT2Q93063 718 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 TSACCQ96A04 125 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-212ENST00000613856 RMDN2Q96LZ7 410 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 C7orf26Q96N11 449 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 TMEM237Q96Q45 408 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 GATA5Q9BWX5 397 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-212ENST00000613856 ERVK-6Q9BXR3 956 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 TRIM54Q9BYV2 358 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 ZDHHC5Q9C0B5 715 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 WASH6PQ9NQA3 447 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 CD274Q9NZQ7 290 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 SUSD2Q9UGT4 822 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 MOSPD1Q9UJG1 213 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 PDE10AQ9Y233 779 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 KCNK6Q9Y257 313 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 DNAJC16Q9Y2G8 782 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 SNX11Q9Y5W9 270 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 COL5A1P20908 1838 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-212ENST00000613856 KNTC1P50748 2209 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 NAV2Q8IVL1 2488 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 TDRD6O60522 2096 aaKnown RBP11.12□□□□□ -0.63
SLIRP-212ENST00000613856 GMNCA6NCL1 334 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 PABPN1LA6NDY0 278 aaKnown RBP11.12□□□□□ -0.63
SLIRP-212ENST00000613856 TLR4O00206 839 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 IFRD1O00458 451 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-212ENST00000613856 BCAT2O15382 392 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-212ENST00000613856 C1orf105O95561 183 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 RPN2P04844 631 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 RPS17P08708 135 aaKnown RBP11.12□□□□□ -0.63
SLIRP-212ENST00000613856 ANXA5P08758 320 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 HIST1H2AGP0C0S8 130 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-212ENST00000613856 NME1P15531 152 aaKnown RBP11.12□□□□□ -0.63
SLIRP-212ENST00000613856 HIST1H2ADP20671 130 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 IMPDH1P20839 514 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 RPIAP49247 311 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 HNMTP50135 292 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 AFF3P51826 1226 aaKnown RBP11.12□□□□□ -0.63
SLIRP-212ENST00000613856 NXPH1P58417 271 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 CTBSQ01459 385 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 STX3Q13277 289 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 RCN2Q14257 317 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 PCBP2Q15366 365 aaKnown RBP eCLIP11.12□□□□□ -0.63
SLIRP-212ENST00000613856 PFKFB4Q16877 469 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.12□□□□□ -0.63
SLIRP-212ENST00000613856 ZNF678Q5SXM1 525 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 CES4AQ5XG92 561 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 ZCCHC23Q6ZST2 131 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 HID1Q8IV36 788 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 DCUN1D3Q8IWE4 304 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 PHACTR4Q8IZ21 702 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 MAGEC3Q8TD91 643 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 GPBAR1Q8TDU6 330 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 SKA1Q96BD8 255 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 RHBDF1Q96CC6 855 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 PHF21BQ96EK2 531 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 HIST1H2AHQ96KK5 128 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 HIST1H2AJQ99878 128 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 H2AFJQ9BTM1 129 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 TRMOQ9BU70 441 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 DRC3Q9H069 523 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 NSRP1Q9H0G5 558 aaKnown RBP11.12□□□□□ -0.63
SLIRP-212ENST00000613856 WWP1Q9H0M0 922 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 EPN3Q9H201 632 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 THAP1Q9NVV9 213 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 PTBP2Q9UKA9 531 aaKnown RBP11.12□□□□□ -0.63
SLIRP-212ENST00000613856 TNPO3Q9Y5L0 923 aaKnown RBP11.12□□□□□ -0.63
SLIRP-212ENST00000613856 ST14Q9Y5Y6 855 aa11.12□□□□□ -0.63
SLIRP-212ENST00000613856 A6NCN8 305 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 MYO1CO00159 1063 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 FLRT2O43155 660 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 EDF1O60869 148 aaKnown RBP11.11□□□□□ -0.63
SLIRP-212ENST00000613856 CER1O95813 267 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 CSF2P04141 144 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 VIMP08670 466 aaKnown RBP11.11□□□□□ -0.63
SLIRP-212ENST00000613856 ZNF883P0CG24 379 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 MAP4P27816 1152 aaKnown RBP11.11□□□□□ -0.63
SLIRP-212ENST00000613856 GGT5P36269 586 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 BDKRB1P46663 353 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 SLC1A6P48664 564 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 NAGLUP54802 743 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 ABCE1P61221 599 aaKnown RBP11.11□□□□□ -0.63
SLIRP-212ENST00000613856 GALNT1Q10472 559 aaPredicted RBP11.11□□□□□ -0.63
SLIRP-212ENST00000613856 ILF3Q12906 894 aaKnown RBP eCLIP11.11□□□□□ -0.63
SLIRP-212ENST00000613856 ABRQ12979 859 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 TEAD4Q15561 434 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 UNC50Q53HI1 259 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 PRAMEF14Q5SWL7 426 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 ABRAXAS1Q6UWZ7 409 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 FRMD7Q6ZUT3 714 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 SPATS2Q86XZ4 545 aaKnown RBP11.11□□□□□ -0.63
SLIRP-212ENST00000613856 NRROSQ86YC3 692 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 KLHDC8AQ8IYD2 350 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 LRRC34Q8IZ02 419 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 OR5K2Q8NHB8 316 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 ZNF483Q8TF39 744 aaPredicted RBP11.11□□□□□ -0.63
SLIRP-212ENST00000613856 ATL1Q8WXF7 558 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 FBXL8Q96CD0 374 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 CNDP1Q96KN2 507 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 CCDC138Q96M89 665 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms