RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 GBA3Q9H227 469 aa6.06□□□□□ -1.44
CUX1-220ENST00000607092 FAM8A1Q9UBU6 413 aa6.06□□□□□ -1.44
CUX1-220ENST00000607092 TEKT2Q9UIF3 430 aa6.06□□□□□ -1.44
CUX1-220ENST00000607092 FKBPLQ9UIM3 349 aa6.06□□□□□ -1.44
CUX1-220ENST00000607092 FBXL4Q9UKA2 621 aa6.06□□□□□ -1.44
CUX1-220ENST00000607092 CDC14AQ9UNH5 594 aa6.06□□□□□ -1.44
CUX1-220ENST00000607092 ASF1AQ9Y294 204 aa6.06□□□□□ -1.44
CUX1-220ENST00000607092 FAM169AQ9Y6X4 670 aa6.06□□□□□ -1.44
CUX1-220ENST00000607092 PIKFYVEQ9Y2I7 2098 aa6.06□□□□□ -1.44
CUX1-220ENST00000607092 ADGRG4Q8IZF6 3080 aa6.06□□□□□ -1.44
CUX1-220ENST00000607092 PCNX1Q96RV3 2341 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 DCHS2Q6V1P9 2916 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 ARHGAP10A1A4S6 786 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 CCDC78A2IDD5 438 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 ISM1B1AKI9 464 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 MAP2K7O14733 419 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 DSCR3O14972 297 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 CBFA2T2O43439 604 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 BUD23O43709 281 aaKnown RBP6.05□□□□□ -1.44
CUX1-220ENST00000607092 ZG16O60844 167 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 PHF2O75151 1096 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 JRKO75564 520 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 GAS8O95995 478 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 HPP00738 406 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 F12P00748 615 aaPredicted RBP6.05□□□□□ -1.44
CUX1-220ENST00000607092 GYPCP04921 128 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 CHRM5P08912 532 aaPredicted RBP6.05□□□□□ -1.44
CUX1-220ENST00000607092 OR56A5P0C7T3 313 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 AGAP20933 346 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 CTNNA2P26232 953 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 ACRV1P26436 265 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 SSTR2P30874 369 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 CD68P34810 354 aaPredicted RBP6.05□□□□□ -1.44
CUX1-220ENST00000607092 PBX1P40424 430 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 CDKN2BP42772 138 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 CHRNA4P43681 627 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 RAB28P51157 221 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 SMSP52788 366 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 COPS2P61201 443 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 ARG2P78540 354 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 XIAPP98170 497 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 OCA2Q04671 838 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 CACNG1Q06432 222 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 TAZQ16635 292 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 LONRF1Q17RB8 773 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 PRAMEF17Q5VTA0 474 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 C1orf189Q5VU69 101 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 PRMT9Q6P2P2 845 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 FBXO38Q6PIJ6 1188 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 XKRXQ6PP77 449 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 TMEM207Q6UWW9 146 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 MFSD7Q6UXD7 560 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 NPNTQ6UXI9 565 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 RANBP10Q6VN20 620 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 SPOCD1Q6ZMY3 1216 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 BNC2Q6ZN30 1099 aaPredicted RBP6.05□□□□□ -1.44
CUX1-220ENST00000607092 RIPOR1Q6ZS17 1223 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 TTLL10Q6ZVT0 673 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 NLRP9Q7RTR0 991 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 TAS2R42Q7RTR8 314 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 ZC3H18Q86VM9 953 aaKnown RBP6.05□□□□□ -1.44
CUX1-220ENST00000607092 CCDC50Q8IVM0 306 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 KBTBD2Q8IY47 623 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 KATNAL2Q8IYT4 538 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 DNAJC22Q8N4W6 341 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 ZNF655Q8N720 491 aaPredicted RBP6.05□□□□□ -1.44
CUX1-220ENST00000607092 GSDMBQ8TAX9 411 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 ZUFSPQ96AP4 578 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 THAP11Q96EK4 314 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 CNDP1Q96KN2 507 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 MAGEB10Q96LZ2 347 aaPredicted RBP6.05□□□□□ -1.44
CUX1-220ENST00000607092 PPM1MQ96MI6 270 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 RANBP9Q96S59 729 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 TRIM56Q9BRZ2 755 aaKnown RBP6.05□□□□□ -1.44
CUX1-220ENST00000607092 HGH1Q9BTY7 390 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 FICDQ9BVA6 458 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 ARNT2Q9HBZ2 717 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 SLC6A20Q9NP91 592 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 ENAMQ9NRM1 1142 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 UTP6Q9NYH9 597 aaKnown RBP6.05□□□□□ -1.44
CUX1-220ENST00000607092 EURLQ9NYK6 297 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.05□□□□□ -1.44
CUX1-220ENST00000607092 NENFQ9UMX5 172 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 CDYLQ9Y232 598 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 EFR3BQ9Y2G0 817 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 MRPS2Q9Y399 296 aaKnown RBP6.05□□□□□ -1.44
CUX1-220ENST00000607092 ARL5AQ9Y689 179 aa6.05□□□□□ -1.44
CUX1-220ENST00000607092 ZGRF1Q86YA3 2104 aa6.04□□□□□ -1.44
CUX1-220ENST00000607092 NSG1A0A0A6YYJ2 146 aa6.04□□□□□ -1.44
CUX1-220ENST00000607092 TRBV5-4A0A0C4DH59 114 aa6.04□□□□□ -1.44
CUX1-220ENST00000607092 GOLGA6L9A6NEM1 432 aa6.04□□□□□ -1.44
CUX1-220ENST00000607092 TARM1B6A8C7 271 aa6.04□□□□□ -1.44
CUX1-220ENST00000607092 H3BMH7 237 aa6.04□□□□□ -1.44
CUX1-220ENST00000607092 H7C0C1 242 aa6.04□□□□□ -1.44
CUX1-220ENST00000607092 E2F3O00716 465 aa6.04□□□□□ -1.44
CUX1-220ENST00000607092 CDK2AP1O14519 115 aa6.04□□□□□ -1.44
CUX1-220ENST00000607092 PSMD3O43242 534 aa6.04□□□□□ -1.44
CUX1-220ENST00000607092 AGTP01019 485 aa6.04□□□□□ -1.44
CUX1-220ENST00000607092 SERPINA7P05543 415 aa6.04□□□□□ -1.44
CUX1-220ENST00000607092 UMODP07911 640 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms