RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 MANSC4A6NHS7 340 aaPredicted RBP8.54□□□□□ -1.04
CSMD1-216ENST00000602557 XKRYO14609 159 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 ADH1CP00326 375 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 NUDT7P0C024 238 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 DAG1Q14118 895 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 SMARCD3Q6STE5 483 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 FRRS1Q6ZNA5 592 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 SLC9A9Q8IVB4 645 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 OR10A6Q8NH74 314 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 IL4I1Q96RQ9 567 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 SLC27A6Q9Y2P4 619 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 C13orf42A0A1B0GVH6 325 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 CLCA1A8K7I4 914 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 CCL22O00626 93 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 ICMTO60725 284 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 ATG13O75143 517 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 CASP9P55211 416 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 PITPNAQ00169 270 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 BTN1A1Q13410 526 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 TUBB3Q13509 450 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 HECTD2Q5U5R9 776 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 POP5Q969H6 163 aaKnown RBP8.54□□□□□ -1.04
CSMD1-216ENST00000602557 TMBIM1Q969X1 311 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 CNTNAP1P78357 1384 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 A0A1W2PQH9 124 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 CD52P31358 61 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 SCGB2B2Q4G0G5 96 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 DACT2Q5SW24 774 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 ZNF627Q7L945 461 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 LDB1Q86U70 411 aaPredicted RBP8.54□□□□□ -1.04
CSMD1-216ENST00000602557 MARCH9Q86YJ5 346 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 SCML4Q8N228 414 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 Q8N9G6 341 aaPredicted RBP8.54□□□□□ -1.04
CSMD1-216ENST00000602557 THAP6Q8TBB0 222 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 AUTS2Q8WXX7 1259 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 ST8SIA2Q92186 375 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 ZNF558Q96NG5 402 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 TBX5Q99593 518 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 SOX17Q9H6I2 414 aaPredicted RBP8.54□□□□□ -1.04
CSMD1-216ENST00000602557 NECTIN3Q9NQS3 549 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 ENAMQ9NRM1 1142 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 ERVK13-1Q9NX77 482 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 AGLP35573 1532 aa8.54□□□□□ -1.04
CSMD1-216ENST00000602557 WTIPA6NIX2 430 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 IL32P24001 234 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 RPL26P61254 145 aaKnown RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 ZNF155Q12901 538 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 ARL13AQ5H913 290 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 CANT1Q8WVQ1 401 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 PEX13Q92968 403 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 CPXM1Q96SM3 734 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 RRAGCQ9HB90 399 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 URADA6NGE7 173 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 DCLK1O15075 740 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 SLC6A4P31645 630 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 DGKEP52429 567 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 CAPZA1P52907 286 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 CDK18Q07002 472 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 CCBE1Q6UXH8 406 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 MARVELD2Q8N4S9 558 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 ATP6V1C2Q8NEY4 427 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 BIRC8Q96P09 236 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 PAK1IP1Q9NWT1 392 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 PTGIRP43119 386 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 CLCA4Q14CN2 919 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 CRY2Q49AN0 593 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 RNF31Q96EP0 1072 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 KCTD7Q96MP8 289 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 GLOD4Q9HC38 313 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 KCNIP3Q9Y2W7 256 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 SPTBP11277 2137 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 GLYATL1P3A0A0U1RQE8 302 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 PGAM2P15259 253 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 IL4RP24394 825 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 NFE2L1Q14494 772 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 GPR158Q5T848 1215 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 CHSY3Q70JA7 882 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 ASB15Q8WXK1 588 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 EXOSC8Q96B26 276 aaKnown RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 CSPG4P5Q96PW8 444 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 BRINP2Q9C0B6 783 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 OSER1Q9NX31 292 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 KRBA1A5PL33 1030 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 SPATA31C2B4DYI2 1134 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 MATN4O95460 622 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 F7P08709 466 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 PTX3P26022 381 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 ZNF648Q5T619 568 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 ZBTB2Q8N680 514 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 OR5K1Q8NHB7 308 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 SLC7A6OSQ96CW6 309 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 TRIM2Q9C040 744 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 QPCTLQ9NXS2 382 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 TIMM22Q9Y584 194 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 FFAR2O15552 330 aa8.53□□□□□ -1.04
CSMD1-216ENST00000602557 DHX15O43143 795 aaKnown RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 MAFO75444 373 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 DDNO94850 711 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 ERP29P30040 261 aaKnown RBP8.53□□□□□ -1.04
CSMD1-216ENST00000602557 ASMTP46597 345 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms