RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 EURLQ9NYK6 297 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 TFR2Q9UP52 801 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 PCSK5Q92824 1860 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 CELSR2Q9HCU4 2923 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 TARM1B6A8C7 271 aa17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 ALAS2P22557 587 aa17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 ADRA1DP25100 572 aa17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 FOXN2P32314 431 aa17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 AARS2Q5JTZ9 985 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 C1orf189Q5VU69 101 aa17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 UNC5DQ6UXZ4 953 aa17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 MCATQ8IVS2 390 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 SLC22A15Q8IZD6 547 aa17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 CISD2Q8N5K1 135 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 SLC35B2Q8TB61 432 aa17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 C5orf34Q96MH7 638 aa17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 FAM118BQ9BPY3 351 aa17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 RAB11FIP5Q9BXF6 653 aa17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 PRSS21Q9Y6M0 314 aa17.14■□□□□ 0.33
SHKBP1-227ENST00000602011 POLEQ07864 2286 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 A0A1B0GX78 115 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 CCDC162PA2VCL2 907 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 ANKUB1A6NFN9 424 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 KPNA5O15131 536 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 SRPX2O60687 465 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 SUN1O94901 812 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 APOA4P06727 396 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 TPBGLP0DKB5 382 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 CD9P21926 228 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 FDFT1P37268 417 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 DCTP40126 519 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 KLF1Q13351 362 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 GRM7Q14831 915 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 BRD3Q15059 726 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 CRB2Q5IJ48 1285 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 PPP1R32Q7Z5V6 425 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 TRIM73Q86UV7 250 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 DCUN1D3Q8IWE4 304 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 RAB42Q8N4Z0 105 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 OR4L1Q8NH43 312 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 ASF1BQ9NVP2 202 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 DHCR7Q9UBM7 475 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 ERRFI1Q9UJM3 462 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 ANAPC5Q9UJX4 755 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 CDYLQ9Y232 598 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 DUSP10Q9Y6W6 482 aa17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 TEP1Q99973 2627 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-227ENST00000602011 RCCD1A6NED2 376 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 GPC4O75487 556 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 LDLRP01130 860 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 PRSS56P0CW18 603 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 ATXN8OSP0DMR3 200 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 PKLRP30613 574 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 GCGRP47871 477 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 ACVR1Q04771 509 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 NAA25Q14CX7 972 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 NR6A1Q15406 480 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 FASTKD1Q53R41 847 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 AGAP7PQ5VUJ5 663 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 PRAMEF13Q5VWM6 474 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 IGFL2Q6UWQ7 119 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 GSDMBQ8TAX9 411 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 PPP4R1Q8TF05 950 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 HDAC10Q969S8 669 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 AGAP4Q96P64 663 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 NRTNQ99748 197 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 PIKFYVEQ9Y2I7 2098 aa17.12■□□□□ 0.33
SHKBP1-227ENST00000602011 LRBAP50851 2863 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 GRID2IPA4D2P6 1211 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 AP3B1O00203 1094 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 DSCR3O14972 297 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 HCRTR1O43613 425 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 SLCO2B1O94956 709 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 UMODP07911 640 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 GLRBP48167 497 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 PRAMEP78395 509 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 HSPA14Q0VDF9 509 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 KIF5AQ12840 1032 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 TMED2Q15363 201 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 DEFB110Q30KQ9 67 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 TSTD2Q5T7W7 516 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 B3GNTL1Q67FW5 361 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 TTLL10Q6ZVT0 673 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 SLC34A3Q8N130 599 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 TTC29Q8NA56 475 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 ST6GALNAC3Q8NDV1 305 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 OR52K1Q8NGK4 314 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 OR13J1Q8NGT2 312 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 OR6P1Q8NGX9 317 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 OR2L8Q8NGY9 312 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 MAGEC3Q8TD91 643 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 RAD51AP1Q96B01 352 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 PANX3Q96QZ0 392 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 WDR77Q9BQA1 342 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 TMEM121Q9BTD3 319 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 LACRTQ9GZZ8 138 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 SEMA3GQ9NS98 782 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 SLC39A10Q9ULF5 831 aa17.11■□□□□ 0.33
SHKBP1-227ENST00000602011 PCDHGA10Q9Y5H3 936 aa17.11■□□□□ 0.33
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