RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 NRSN2Q9GZP1 204 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 TWSG1Q9GZX9 223 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 VPS11Q9H270 941 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 STN1Q9H668 368 aaKnown RBP11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 PARVBQ9HBI1 364 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 SLC40A1Q9NP59 571 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 PCMTD2Q9NV79 361 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 EVA1BQ9NVM1 165 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 GRID1Q9ULK0 1009 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 PSMD13Q9UNM6 376 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 ASF1AQ9Y294 204 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 LY6G6EA0A0G2JKS1 128 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 LILRA5A6NI73 299 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 OR52A4PA6NMU1 304 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 ARHGEF33A8MVX0 844 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 B4DGG1 531 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 BTN3A1O00481 513 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 PRPF4O43172 522 aaKnown RBP eCLIP11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 SIGLEC6O43699 453 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 NUDT21O43809 227 aaKnown RBP11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 TYROBPO43914 113 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 GLB1P16278 677 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 HSD17B2P37059 387 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 GPR3P46089 330 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 IRF9Q00978 393 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 INSM1Q01101 510 aaPredicted RBP11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 TLE3Q04726 772 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 ABRQ12979 859 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 ARHGAP19Q14CB8 494 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 SEPT7Q16181 437 aaKnown RBP11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 PROX2Q3B8N5 592 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 TECRLQ5HYJ1 363 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 TTC23LQ6PF05 361 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 UBE2R2Q712K3 238 aaPredicted RBP11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 SLC35F3Q8IY50 421 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 SRRM1Q8IYB3 904 aaKnown RBP11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 HMGCLL1Q8TB92 370 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 MCOLN3Q8TDD5 553 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 SKA2Q8WVK7 121 aaPredicted RBP11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 DLG3Q92796 817 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 PTERQ96BW5 349 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 CXorf40BQ96DE9 158 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 APOPT1Q96IL0 206 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 ATOH8Q96SQ7 321 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 MENTQ9BUN1 341 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 TRIM54Q9BYV2 358 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 EPB41L1Q9H4G0 881 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 SPATA7Q9P0W8 599 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 TMCO1Q9UM00 188 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 RUVBL2Q9Y230 463 aaKnown RBP11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 PDE10AQ9Y233 779 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 OARD1Q9Y530 152 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 AK5Q9Y6K8 562 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 U3KQA8 63 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 HEATR5BQ9P2D3 2071 aa11.31□□□□□ -0.6
CHMP2A-207ENST00000600804 EME2A4GXA9 379 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 SYCE1LA8MT33 242 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 HMGB1P1B2RPK0 211 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 TARM1B6A8C7 271 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 GOLGA8RI6L899 631 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 CDC7O00311 574 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 COPEO14579 308 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 FFAR2O15552 330 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 KLK8O60259 260 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 SYF2O95926 243 aaKnown RBP11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 VIPP01282 170 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 CKMT1AP12532 417 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 TFEBP19484 476 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 MAP4P27816 1152 aaKnown RBP11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 DUSP3P51452 185 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 EPHA4P54764 986 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 HHEXQ03014 270 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 GRB7Q14451 532 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 NR0B2Q15466 257 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 TGFBIQ15582 683 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 TSNQ15631 228 aaKnown RBP11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 CYP2A13Q16696 494 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 CCDC153Q494R4 210 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 CDHR3Q6ZTQ4 885 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 TMEM26Q6ZUK4 368 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 TRIM48Q8IWZ4 208 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 SPACA3Q8IXA5 215 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 TMEM151AQ8N4L1 468 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 GOLGA6L1Q8N7Z2 621 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 KYQ8NBH2 561 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 OR5AR1Q8NGP9 310 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 OR9A1PQ8NGU1 263 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 PATE1Q8WXA2 126 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 NAT6Q93015 286 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 ARL8AQ96BM9 186 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 ATP6V1G3Q96LB4 118 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 APOLD1Q96LR9 279 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 CCDC138Q96M89 665 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 RAB11FIP5Q9BXF6 653 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 SEMA4CQ9C0C4 833 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 MRPL46Q9H2W6 279 aaKnown RBP11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 MED4Q9NPJ6 270 aa11.3□□□□□ -0.6
CHMP2A-207ENST00000600804 IMP3Q9NV31 184 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms