RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 SELENOMQ8WWX9 145 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 TRMT2BQ96GJ1 504 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 SCLYQ96I15 445 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 ITCHQ96J02 903 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 VNN3Q9NY84 501 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 WARS2Q9UGM6 360 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 TMEFF2Q9UIK5 374 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 ABT1Q9ULW3 272 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 PTGES3LE9PB15 166 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 J3QRK9 145 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 GFRA2O00451 464 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 ERN1O75460 977 aaKnown RBP19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 ZNF821O75541 412 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 PTPN6P29350 595 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 CCR7P32248 378 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 MLLT10P55197 1068 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 ISL1P61371 349 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 SLC14A1Q13336 389 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 PGS1Q32NB8 556 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 LYPLAL1Q5VWZ2 237 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 RFLNAQ6ZTI6 216 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 PYCR2Q96C36 320 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 FBXL8Q96CD0 374 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 TSEN34Q9BSV6 310 aaKnown RBP19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 BEGAINQ9BUH8 593 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 SLC29A3Q9BZD2 475 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 KCNH6Q9H252 994 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 SLC32A1Q9H598 525 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 PAK1IP1Q9NWT1 392 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 MBD1Q9UIS9 605 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 C3orf18Q9UK00 162 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 FBXO10Q9UK96 956 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 PSME2Q9UL46 239 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 PPT2Q9UMR5 302 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 CPQQ9Y646 472 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 A0A096LPI6 279 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 ZBTB11O95625 1053 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 CLDN8P56748 225 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 SP3Q02447 781 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 VEPH1Q14D04 833 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 LAPTM4AQ15012 233 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 MOGQ16653 247 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 GPR33Q49SQ1 333 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 DGKKQ5KSL6 1271 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 LRIF1Q5T3J3 769 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 GRAMD4Q6IC98 578 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 ZNF551Q7Z340 670 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 DCP2Q8IU60 420 aaKnown RBP19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 CHPFQ8IZ52 775 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 SKA2Q8WVK7 121 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 EGLN2Q96KS0 407 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 CCDC138Q96M89 665 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 ATP13A3Q9H7F0 1226 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 KCTD5Q9NXV2 234 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 GPRC5BQ9NZH0 403 aa19.72■□□□□ 0.75
SHKBP1-225ENST00000600733 SLC1A7O00341 560 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 PRRG1O14668 218 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 BNIP3LO60238 219 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 MITFO75030 526 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 XYLBO75191 536 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 NSG1P42857 185 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 B4GALNT1Q00973 533 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 Q6ZNB5 142 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 ZNF554Q86TJ5 538 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 TMEM132CQ8N3T6 1108 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 PYURFQ96I23 114 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 IGSF21Q96ID5 467 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 ELOVL6Q9H5J4 265 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 MAGIXQ9H6Y5 334 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 GPN2Q9H9Y4 310 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 ZNF334Q9HCZ1 680 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 CORINQ9Y5Q5 1042 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 PER2O15055 1255 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 SOCS5O75159 536 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 SDC1P18827 310 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 ATP13A5Q4VNC0 1218 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 ZNF691Q5VV52 312 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 LRRC66Q68CR7 880 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 METTL2BQ6P1Q9 378 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 GALNT18Q6P9A2 607 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 C16orf87Q6PH81 154 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 CRTC1Q6UUV9 634 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 GALNT5Q7Z7M9 940 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 RNF168Q8IYW5 571 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 SLC15A4Q8N697 577 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 ARL10Q8N8L6 244 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 CNIH3Q8TBE1 160 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 FKBP10Q96AY3 582 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 MAGED4Q96JG8 741 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 BARD1Q99728 777 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 FUNDC2Q9BWH2 189 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 SRRDQ9UH36 339 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 BLOC1S6Q9UL45 172 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 MAN2B2Q9Y2E5 1009 aa19.71■□□□□ 0.75
SHKBP1-225ENST00000600733 HOXB9P17482 250 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-225ENST00000600733 HTR1BP28222 390 aa19.7■□□□□ 0.74
SHKBP1-225ENST00000600733 GABARAPL2P60520 117 aa19.7■□□□□ 0.74
SHKBP1-225ENST00000600733 HSPA14Q0VDF9 509 aa19.7■□□□□ 0.74
SHKBP1-225ENST00000600733 AQP6Q13520 282 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms