RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 OSGEPL1Q9H4B0 414 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 INTS7Q9NVH2 962 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 RIC8BQ9NVN3 520 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 KCNK6Q9Y257 313 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 RNF11Q9Y3C5 154 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 SIT1Q9Y3P8 196 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 PRDX6P30041 224 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 PCDH1Q08174 1060 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 GGTA1PQ4G0N0 100 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 XKR7Q5GH72 579 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 CYB5D1Q6P9G0 228 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 TBC1D21Q8IYX1 336 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 L3MBTL4Q8NA19 623 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 OR5AR1Q8NGP9 310 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 OR5K2Q8NHB8 316 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 FAM174AQ8TBP5 190 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 KLHL29Q96CT2 875 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 TUBGCP3Q96CW5 907 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 CMTM5Q96DZ9 223 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 MED8Q96G25 268 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 PCED1AQ9H1Q7 454 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 TRIT1Q9H3H1 467 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 POLG2Q9UHN1 485 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 G3BP2Q9UN86 482 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 PLEKHM1Q9Y4G2 1056 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 PTGDR2Q9Y5Y4 395 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 ANKRD12Q6UB98 2062 aa17.14■□□□□ 0.34
SHKBP1-224ENST00000600718 A0A1W2PPC4 97 aa17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 NDUFS2O75306 463 aa17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 LBPP18428 481 aa17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 RPL10P27635 214 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 HSD17B2P37059 387 aa17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 MTAPQ13126 283 aa17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 CAPN13Q6MZZ7 669 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 ASRGL1Q7L266 308 aa17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 SYTL1Q8IYJ3 562 aa17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 FRMD1Q8N878 549 aa17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 SLC7A6OSQ96CW6 309 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 IER2Q9BTL4 223 aa17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 KLQ9UEF7 1012 aa17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 CIDEBQ9UHD4 219 aa17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 COPG1Q9Y678 874 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-224ENST00000600718 UGDHO60701 494 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 PTPN4P29074 926 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 PNLIPRP1P54315 467 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 SRP54P61011 504 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 IRX1P78414 480 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 LRP8Q14114 963 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 PTK2BQ14289 1009 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 NAA25Q14CX7 972 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 TCHHL1Q5QJ38 904 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 TPRG1LQ5T0D9 272 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 LIPJQ5W064 366 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 IL27RAQ6UWB1 636 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 SPATA19Q7Z5L4 167 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 LRMDAQ9H2I8 198 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 GPRC5BQ9NZH0 403 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 MUTYHQ9UIF7 546 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 WDR37Q9Y2I8 494 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 CFAP73A6NFT4 308 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 CLGNO14967 610 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 ULK1O75385 1050 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 KRT6AP02538 564 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 KRT6BP04259 564 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 PRR35P0CG20 571 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 CXCL12P48061 93 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 KRT6CP48668 564 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 ATP4BP51164 291 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 GRB7Q14451 532 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 SQLEQ14534 574 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 ARHGAP19Q14CB8 494 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 UAP1L1Q3KQV9 507 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 OGFOD2Q6N063 350 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 SCIMPQ6UWF3 145 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 MYLK4Q86YV6 388 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 FAM160A2Q8N612 972 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 PPFIBP2Q8ND30 876 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 SETD7Q8WTS6 366 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 TSACCQ96A04 125 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 PDXPQ96GD0 296 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 C12orf66Q96MD2 445 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 INSM2Q96T92 566 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 SGPP1Q9BX95 441 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 TDRKHQ9Y2W6 561 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 KCNE2Q9Y6J6 123 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 PRUNE2Q8WUY3 3088 aa17.13■□□□□ 0.33
SHKBP1-224ENST00000600718 E7ENX8 843 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 SLC28A1O00337 649 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 MANBAO00462 879 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 ZFC3H1O60293 1989 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 CCND1P24385 295 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 PIK3R1P27986 724 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 HALP42357 657 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 PXNP49023 591 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 HTR6P50406 440 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 IRF8Q02556 426 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 TAP2Q03519 686 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 CHIT1Q13231 466 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 ABRAXAS2Q15018 415 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms