RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 MTHFRP42898 656 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 SPINT3P49223 89 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 NAA20P61599 178 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 MYBPC3Q14896 1274 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZNF284Q2VY69 593 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 GPR33Q49SQ1 333 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 ARHGAP15Q53QZ3 475 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 GPR107Q5VW38 600 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 CRTC3Q6UUV7 619 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 SYTL1Q8IYJ3 562 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 DHRSXQ8N5I4 330 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 APIPQ96GX9 242 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZBP1Q9H171 429 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 C1orf109Q9NX04 203 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 ABCD2Q9UBJ2 740 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 WASH3PC4AMC7 463 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 ELFN1P0C7U0 828 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 ATP1B2P14415 290 aaPredicted RBP11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 MYOGP15173 224 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 WASP42768 502 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 MERTKQ12866 999 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 FAM180BQ6P0A1 224 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 REM2Q8IYK8 340 aaPredicted RBP11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 PDPRQ8NCN5 879 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 OR2A12Q8NGT7 310 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 TMEM159Q96B96 161 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZNF689Q96CS4 500 aaPredicted RBP11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZNF597Q96LX8 424 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 EMILIN2Q9BXX0 1053 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 CCDC90BQ9GZT6 254 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 DNMT3BQ9UBC3 853 aaKnown RBP11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 MRPS23Q9Y3D9 190 aaKnown RBP11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 PRKD3O94806 890 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 H6PDO95479 791 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 CST1P01037 141 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 ANXA6P08133 673 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZFP36L2P47974 494 aaKnown RBP11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 ENTPD1P49961 510 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 CTSCP53634 463 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 RPS14P62263 151 aaKnown RBP11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 HPCAP84074 193 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 MEF2AQ02078 507 aaPredicted RBP11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 CYP4F3Q08477 520 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 MESP2Q0VG99 397 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 TMEM215Q68D42 235 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 LCN8Q6JVE9 175 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 NEK5Q6P3R8 708 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 CYP2U1Q7Z449 544 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 GPR141Q7Z602 305 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 SYT12Q8IV01 421 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 CHERPQ8IWX8 916 aaKnown RBP11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 RAVER1Q8IY67 606 aaKnown RBP11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 GIPC3Q8TF64 312 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 MRPS26Q9BYN8 205 aaKnown RBP11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 BRINP2Q9C0B6 783 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 SPHK2Q9NRA0 654 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 DUS2Q9NX74 493 aaKnown RBP11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 PRKAG2Q9UGJ0 569 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 FNDC1Q4ZHG4 1894 aaPredicted RBP11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 CYP4B1P13584 511 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 CYP2A7P20853 494 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 RPS9P46781 194 aaKnown RBP11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 NR1H2P55055 460 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 ST8SIA6P61647 398 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 FAM98BQ52LJ0 330 aaKnown RBP11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 XKR5Q6UX68 686 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 TRMT11Q7Z4G4 463 aaKnown RBP11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 GALNT5Q7Z7M9 940 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 AHI1Q8N157 1196 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 TMBIM1Q969X1 311 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 AP2M1Q96CW1 435 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 SLC32A1Q9H598 525 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 AGPAT4Q9NRZ5 378 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 GPRC5BQ9NZH0 403 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 RSL24D1Q9UHA3 163 aaKnown RBP11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 STOML2Q9UJZ1 356 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 PNMA8BQ9ULN7 279 aaPredicted RBP11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 TMCO1Q9UM00 188 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 SLC8A2Q9UPR5 921 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 SDK1Q7Z5N4 2213 aa11.24□□□□□ -0.61
ARHGEF1-220ENST00000600274 GNG14A0A1W2PPG7 69 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 SLC28A1O00337 649 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 VILLO15195 856 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 ENO2P09104 434 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 PRR35P0CG20 571 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 PRMT2P55345 433 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 POLR2LP62875 67 aaKnown RBP11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 SLC7A9P82251 487 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 PWP1Q13610 501 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 GRM2Q14416 872 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 C8orf82Q6P1X6 216 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 DLEU7Q6UYE1 221 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 OR7A2PQ8NGA2 310 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 SNX19Q92543 992 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZUFSPQ96AP4 578 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 ITCHQ96J02 903 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 HEPHQ9BQS7 1158 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 PNPLA3Q9NST1 481 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 PTTG2Q9NZH5 202 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 SH3BP4Q9P0V3 963 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms