RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 HIF1AQ16665 826 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 SLC5A12Q1EHB4 618 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 CCSMST1Q4G0I0 132 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 KIRREL2Q6UWL6 708 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 SHISA6Q6ZSJ9 500 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 HPS6Q86YV9 775 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 SLC22A15Q8IZD6 547 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 IQCKQ8N0W5 287 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 KRT222Q8N1A0 295 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 PROKR1Q8TCW9 393 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 ZNF285Q96NJ3 590 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 PANX2Q96RD6 677 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 SPSB2Q99619 263 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 TRIM5Q9C035 493 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 VPS37BQ9H9H4 285 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 ETNK1Q9HBU6 452 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 SLC6A20Q9NP91 592 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 MARCH4Q9P2E8 410 aaPredicted RBP10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 STOX2Q9P2F5 926 aaPredicted RBP10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 POLG2Q9UHN1 485 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 FBXL4Q9UKA2 621 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 G3BP2Q9UN86 482 aaKnown RBP10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 DIDO1Q9BTC0 2240 aaKnown RBP10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 APCP25054 2843 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 DOCK10Q96BY6 2186 aa10.59□□□□□ -0.71
GRAMD1A-209ENST00000598580 ANKUB1A6NFN9 424 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 CTSVO60911 334 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 FTCDO95954 541 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 FTH1P02794 183 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 CD9P21926 228 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 ALAS2P22557 587 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 CYLC1P35663 651 aaPredicted RBP10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 ZNF75DP51815 510 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 ACVR1Q04771 509 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 KIR2DS3Q14952 304 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 NKG7Q16617 165 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 TSTD2Q5T7W7 516 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 TLDC1Q6P9B6 456 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 IGFL2Q6UWQ7 119 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 TTLL10Q6ZVT0 673 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 OVCH1Q7RTY7 1134 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 MAMDC2Q7Z304 686 aaPredicted RBP10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 TAX1BP1Q86VP1 789 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 TMTC1Q8IUR5 882 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 TMEM139Q8IV31 216 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 METTL27Q8N6F8 245 aaPredicted RBP10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 FER1L6-AS2Q96M78 137 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 ENAMQ9NRM1 1142 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 CTSFQ9UBX1 484 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 PADI2Q9Y2J8 665 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 HS3ST3B1Q9Y662 390 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 SVILO95425 2214 aa10.58□□□□□ -0.72
GRAMD1A-209ENST00000598580 LOC105369274A0A096LPK9 316 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 LOC102723532A0A0G2JNH3 316 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 AGPSO00116 658 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 PEX12O00623 359 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 E2F3O00716 465 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 MAP3K7O43318 606 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 SUN1O94901 812 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 MMP11P24347 488 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 AOAHP28039 575 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 OR1D4P47884 311 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 GLRBP48167 497 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 RAB28P51157 221 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 NAP1L1P55209 391 aaKnown RBP10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 SNRPNP63162 240 aaKnown RBP10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 HSPA14Q0VDF9 509 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 OASLQ15646 514 aaKnown RBP10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 SKOR2Q2VWA4 1001 aaPredicted RBP10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 DNAJC21Q5F1R6 531 aaKnown RBP10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 ZNF449Q6P9G9 518 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 FIGLAQ6QHK4 219 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 KCNMB4Q86W47 210 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 OR4N4Q8N0Y3 316 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 SHISA5Q8N114 240 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 CLEC1AQ8NC01 280 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 CATSPER1Q8NEC5 780 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 CFAP61Q8NHU2 1237 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 DENND1AQ8TEH3 1009 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 N4BP2L2Q92802 583 aaPredicted RBP10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 IP6K3Q96PC2 410 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 PPP1R2P1Q96PQ5 205 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 FERMT1Q9BQL6 677 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 ATP13A2Q9NQ11 1180 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 NDOR1Q9UHB4 597 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 GPN3Q9UHW5 284 aaPredicted RBP10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 RUVBL2Q9Y230 463 aaKnown RBP10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 COPG1Q9Y678 874 aaKnown RBP10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 NFS1Q9Y697 457 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 FBN2P35556 2912 aa10.57□□□□□ -0.72
GRAMD1A-209ENST00000598580 A0A1B0GX78 115 aa10.56□□□□□ -0.72
GRAMD1A-209ENST00000598580 A0A1W2PPV9 198 aa10.56□□□□□ -0.72
GRAMD1A-209ENST00000598580 FITM1A5D6W6 292 aa10.56□□□□□ -0.72
GRAMD1A-209ENST00000598580 VSTM2BA6NLU5 285 aa10.56□□□□□ -0.72
GRAMD1A-209ENST00000598580 KLHL18O94889 574 aa10.56□□□□□ -0.72
GRAMD1A-209ENST00000598580 SLCO2B1O94956 709 aa10.56□□□□□ -0.72
GRAMD1A-209ENST00000598580 OR56A5P0C7T3 313 aa10.56□□□□□ -0.72
GRAMD1A-209ENST00000598580 ZSCAN5DPP0CG00 497 aa10.56□□□□□ -0.72
GRAMD1A-209ENST00000598580 ITGA3P26006 1051 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms