RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 MOCS1Q9NZB8 636 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 ZFATQ9P243 1243 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 TRMT6Q9UJA5 497 aaKnown RBP13.39□□□□□ -0.27
UPF1-205ENST00000598209 DSPP15924 2871 aaKnown RBP13.39□□□□□ -0.27
UPF1-205ENST00000598209 A0A0J9YY10 115 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 ESYT3A0FGR9 886 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 CTAGE15A4D2H0 777 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 ARHGEF33A8MVX0 844 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 MAP3K7O43318 606 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 KIAA0754O94854 1291 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 TIAF1O95411 115 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 DLGAP3O95886 979 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 CATP04040 527 aaKnown RBP13.38□□□□□ -0.27
UPF1-205ENST00000598209 CTAGE8P0CG41 777 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 CBSLP0DN79 551 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 MCM3P25205 808 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 SSTR1P30872 391 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 CBSP35520 551 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 CDKN2DP55273 166 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 TUBB4BP68371 445 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 TIAL1Q01085 375 aaKnown RBP eCLIP13.38□□□□□ -0.27
UPF1-205ENST00000598209 SLC5A12Q1EHB4 618 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.38□□□□□ -0.27
UPF1-205ENST00000598209 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.38□□□□□ -0.27
UPF1-205ENST00000598209 CYHR1Q6ZMK1 362 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 CCDC81Q6ZN84 652 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 TIPARPQ7Z3E1 657 aaKnown RBP13.38□□□□□ -0.27
UPF1-205ENST00000598209 CTAGE6Q86UF2 777 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 BPHLQ86WA6 291 aaPredicted RBP13.38□□□□□ -0.27
UPF1-205ENST00000598209 CCDC25Q86WR0 208 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 CTAGE4Q8IX94 777 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 NLGN4XQ8N0W4 816 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 IL22RA1Q8N6P7 574 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 GPATCH11Q8N954 259 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 C19orf47Q8N9M1 422 aaKnown RBP13.38□□□□□ -0.27
UPF1-205ENST00000598209 NOA1Q8NC60 698 aaKnown RBP13.38□□□□□ -0.27
UPF1-205ENST00000598209 NLGN4YQ8NFZ3 816 aaPredicted RBP13.38□□□□□ -0.27
UPF1-205ENST00000598209 DENND1AQ8TEH3 1009 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 SLC22A18Q96BI1 424 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 PHACTR1Q9C0D0 580 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 SPATA7Q9P0W8 599 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 CORO1CQ9ULV4 474 aaPredicted RBP13.38□□□□□ -0.27
UPF1-205ENST00000598209 PSAT1Q9Y617 370 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 HEATR5BQ9P2D3 2071 aa13.38□□□□□ -0.27
UPF1-205ENST00000598209 TEX51A0A1B0GUA7 166 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 EIF3FO00303 357 aaPredicted RBP13.37□□□□□ -0.27
UPF1-205ENST00000598209 EFSO43281 561 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 MAP4P27816 1152 aaKnown RBP13.37□□□□□ -0.27
UPF1-205ENST00000598209 SKIV2L2P42285 1042 aaKnown RBP13.37□□□□□ -0.27
UPF1-205ENST00000598209 GUCY2DQ02846 1103 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 VAC14Q08AM6 782 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 MAP7Q14244 749 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 ARHGAP40Q5TG30 622 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 HECTD2Q5U5R9 776 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 FAM45BPQ6NSW5 357 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 PWWP2BQ6NUJ5 590 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 PAQR3Q6TCH7 311 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 PIWIL4Q7Z3Z4 852 aaKnown RBP13.37□□□□□ -0.27
UPF1-205ENST00000598209 STRA8Q7Z7C7 330 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 SLC26A11Q86WA9 606 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 FAM20CQ8IXL6 584 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 OR9A1PQ8NGU1 263 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 OR8K5Q8NH50 307 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 FAM45AQ8TCE6 357 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 ASB11Q8WXH4 323 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 SEC14L1Q92503 715 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 ZNF501Q96CX3 271 aaPredicted RBP13.37□□□□□ -0.27
UPF1-205ENST00000598209 FCRL4Q96PJ5 515 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 FANCEQ9HB96 536 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 FAM114A2Q9NRY5 505 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 LNPEPQ9UIQ6 1025 aa13.37□□□□□ -0.27
UPF1-205ENST00000598209 TMEM150CB9EJG8 249 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 GFYI3L273 518 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 K7ENP7 123 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 MYO1CO00159 1063 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 MSL3P1P0C860 447 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 FDXRP22570 491 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 OAS2P29728 719 aaKnown RBP13.36□□□□□ -0.27
UPF1-205ENST00000598209 MAGEA4P43358 317 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 RGS4P49798 205 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 PDAP1Q13442 181 aaKnown RBP13.36□□□□□ -0.27
UPF1-205ENST00000598209 ZIC1Q15915 447 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 CYP2A13Q16696 494 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 LRRC8EQ6NSJ5 796 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 INO80CQ6PI98 192 aaPredicted RBP13.36□□□□□ -0.27
UPF1-205ENST00000598209 C6orf15Q6UXA7 325 aaPredicted RBP13.36□□□□□ -0.27
UPF1-205ENST00000598209 CDHR3Q6ZTQ4 885 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 C3orf62Q6ZUJ4 267 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 GPR155Q7Z3F1 870 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 ZC3HC1Q86WB0 502 aaKnown RBP13.36□□□□□ -0.27
UPF1-205ENST00000598209 TMEM126BQ8IUX1 230 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 ESX1Q8N693 406 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 GALNT6Q8NCL4 622 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 FBXO15Q8NCQ5 510 aaPredicted RBP13.36□□□□□ -0.27
UPF1-205ENST00000598209 HMGCLL1Q8TB92 370 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 EEF1AKMT1Q8WVE0 214 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 TCTN2Q96GX1 697 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 PKP4Q99569 1192 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 OLFM1Q99784 485 aa13.36□□□□□ -0.27
UPF1-205ENST00000598209 SYTL2Q9HCH5 934 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms