RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 GALNT6Q8NCL4 622 aa20.36■□□□□ 0.85
PNKP-209ENST00000596726 HMGCLL1Q8TB92 370 aa20.36■□□□□ 0.85
PNKP-209ENST00000596726 CD200R1Q8TD46 325 aa20.36■□□□□ 0.85
PNKP-209ENST00000596726 MAGEC3Q8TD91 643 aa20.36■□□□□ 0.85
PNKP-209ENST00000596726 UBL7Q96S82 380 aaPredicted RBP20.36■□□□□ 0.85
PNKP-209ENST00000596726 KLHL25Q9H0H3 589 aa20.36■□□□□ 0.85
PNKP-209ENST00000596726 PRICKLE3O43900 615 aaPredicted RBP20.35■□□□□ 0.85
PNKP-209ENST00000596726 MPC1LP0DKB6 136 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 RHDQ02161 417 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 CKAP4Q07065 602 aaKnown RBP20.35■□□□□ 0.85
PNKP-209ENST00000596726 CALCOCO2Q13137 446 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 ZIC1Q15915 447 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 CYHR1Q6ZMK1 362 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 CDHR3Q6ZTQ4 885 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 C19orf47Q8N9M1 422 aaKnown RBP20.35■□□□□ 0.85
PNKP-209ENST00000596726 FBXO36Q8NEA4 188 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 DENND1AQ8TEH3 1009 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 SLC22A18Q96BI1 424 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 RNF31Q96EP0 1072 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 FAM60AQ9NP50 221 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 MOCS1Q9NZB8 636 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 LNPEPQ9UIQ6 1025 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 TSR3Q9UJK0 312 aaKnown RBP20.35■□□□□ 0.85
PNKP-209ENST00000596726 SLC39A10Q9ULF5 831 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 SEC16AO15027 2179 aa20.35■□□□□ 0.85
PNKP-209ENST00000596726 KRT87PA6NCN2 255 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 ARHGEF33A8MVX0 844 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 EIF3FO00303 357 aaPredicted RBP20.34■□□□□ 0.85
PNKP-209ENST00000596726 MAP3K7O43318 606 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 VPS26AO75436 327 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 URI1O94763 535 aaPredicted RBP20.34■□□□□ 0.85
PNKP-209ENST00000596726 MT-ND3P03897 115 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 CBSLP0DN79 551 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 ENO3P13929 434 aaPredicted RBP20.34■□□□□ 0.85
PNKP-209ENST00000596726 CBSP35520 551 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 GABRA4P48169 554 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 CUL1Q13616 776 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.34■□□□□ 0.85
PNKP-209ENST00000596726 KIAA1614Q5VZ46 1190 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 C2orf73Q8N5S3 287 aaPredicted RBP20.34■□□□□ 0.85
PNKP-209ENST00000596726 OR1L3Q8NH93 324 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 TCTN2Q96GX1 697 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 BBC3Q96PG8 261 aaPredicted RBP20.34■□□□□ 0.85
PNKP-209ENST00000596726 NDNQ99608 321 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 SLC12A9Q9BXP2 914 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 FANCEQ9HB96 536 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 PPANQ9NQ55 473 aaKnown RBP20.34■□□□□ 0.85
PNKP-209ENST00000596726 SPATA7Q9P0W8 599 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 SLC17A6Q9P2U8 582 aa20.34■□□□□ 0.85
PNKP-209ENST00000596726 UTP11Q9Y3A2 253 aaKnown RBP20.34■□□□□ 0.85
PNKP-209ENST00000596726 TMEM150CB9EJG8 249 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 GFYI3L273 518 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 MYO1CO00159 1063 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 TERTO14746 1132 aaKnown RBP20.33■□□□□ 0.85
PNKP-209ENST00000596726 EIF3HO15372 352 aaKnown RBP eCLIP20.33■□□□□ 0.85
PNKP-209ENST00000596726 NTRK1P04629 796 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 ERGP11308 486 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 CYP2A13Q16696 494 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 SOWAHCQ53LP3 525 aaPredicted RBP20.33■□□□□ 0.85
PNKP-209ENST00000596726 RBM20Q5T481 1227 aaKnown RBP20.33■□□□□ 0.85
PNKP-209ENST00000596726 PCSK4Q6UW60 755 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 FAM20CQ8IXL6 584 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 ZBED8Q8IZ13 594 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 RAB42Q8N4Z0 105 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 ZSCAN1Q8NBB4 408 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 FBXO15Q8NCQ5 510 aaPredicted RBP20.33■□□□□ 0.85
PNKP-209ENST00000596726 OR9A1PQ8NGU1 263 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 ASB11Q8WXH4 323 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 TTC9Q92623 222 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 SLC45A3Q96JT2 553 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 EFHD1Q9BUP0 239 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 RAB17Q9H0T7 212 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 GPN2Q9H9Y4 310 aaPredicted RBP20.33■□□□□ 0.85
PNKP-209ENST00000596726 PADI1Q9ULC6 663 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 CORO1CQ9ULV4 474 aaPredicted RBP20.33■□□□□ 0.85
PNKP-209ENST00000596726 PCDHB3Q9Y5E6 796 aa20.33■□□□□ 0.85
PNKP-209ENST00000596726 SCRG1O75711 98 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 FKBP9O95302 570 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 CATP04040 527 aaKnown RBP20.32■□□□□ 0.84
PNKP-209ENST00000596726 TUBB4AP04350 444 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 SKIV2L2P42285 1042 aaKnown RBP20.32■□□□□ 0.84
PNKP-209ENST00000596726 CDKN2DP55273 166 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 MGAT5Q09328 741 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 WHAMMP3Q1A5X7 153 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 UGT3A1Q6NUS8 523 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 TMEM126BQ8IUX1 230 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 CPNE9Q8IYJ1 553 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 DNAJC22Q8N4W6 341 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 SLC38A9Q8NBW4 561 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 KIAA1143Q96AT1 154 aaPredicted RBP20.32■□□□□ 0.84
PNKP-209ENST00000596726 LHX9Q9NQ69 397 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 FAM114A2Q9NRY5 505 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 TAS2R13Q9NYV9 303 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 IL17BQ9UHF5 180 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 SERTAD3Q9UJW9 196 aa20.32■□□□□ 0.84
PNKP-209ENST00000596726 CACNA1GO43497 2377 aa20.31■□□□□ 0.84
PNKP-209ENST00000596726 ANKRD12Q6UB98 2062 aa20.31■□□□□ 0.84
PNKP-209ENST00000596726 A0A1W2PPV9 198 aa20.31■□□□□ 0.84
PNKP-209ENST00000596726 H3BMH7 237 aa20.31■□□□□ 0.84
PNKP-209ENST00000596726 ERVH48-1M5A8F1 160 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms