RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ACTRT2Q8TDY3 377 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 KLHDC7BQ96G42 594 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 TRIT1Q9H3H1 467 aaKnown RBP20.19■□□□□ 0.82
PNKP-203ENST00000593946 PRDM8Q9NQV8 689 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 SPATA6Q9NWH7 488 aaPredicted RBP20.19■□□□□ 0.82
PNKP-203ENST00000593946 SPAG17Q6Q759 2223 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 ZDBF2Q9HCK1 2354 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 CCDC163A0A0D9SF12 145 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 E9PBE3 544 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 PIP5K1BO14986 540 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 KLHL41O60662 606 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 RASGRP1O95267 797 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 CAPN1P07384 714 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 ERGP11308 486 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 AK4P27144 223 aaPredicted RBP20.19■□□□□ 0.82
PNKP-203ENST00000593946 HNRNPH2P55795 449 aaKnown RBP20.19■□□□□ 0.82
PNKP-203ENST00000593946 EIF2B5Q13144 721 aaKnown RBP20.19■□□□□ 0.82
PNKP-203ENST00000593946 SPRED3Q2MJR0 410 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 DUS1LQ6P1R4 473 aaKnown RBP20.19■□□□□ 0.82
PNKP-203ENST00000593946 WASH2PQ6VEQ5 465 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 LRRC56Q8IYG6 542 aaPredicted RBP20.19■□□□□ 0.82
PNKP-203ENST00000593946 PPFIBP2Q8ND30 876 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 MED8Q96G25 268 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 C3orf30Q96M34 536 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 HSPA12BQ96MM6 686 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 WASH6PQ9NQA3 447 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 PRMT8Q9NR22 394 aaPredicted RBP20.19■□□□□ 0.82
PNKP-203ENST00000593946 TBC1D29Q9UFV1 150 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 TRPS1Q9UHF7 1281 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 PDZK1P1A8MUH7 402 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 CHEK2O96017 543 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 HGFP14210 728 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 PNLIPRP1P54315 467 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 LACTB2Q53H82 288 aaPredicted RBP20.18■□□□□ 0.82
PNKP-203ENST00000593946 ABRAXAS1Q6UWZ7 409 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 DCP2Q8IU60 420 aaKnown RBP20.18■□□□□ 0.82
PNKP-203ENST00000593946 SYTL1Q8IYJ3 562 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 MFSD2AQ8NA29 543 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 CEP70Q8NHQ1 597 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 CCL4L1Q8NHW4 92 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 METTL6Q8TCB7 284 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 OR4K3Q96R72 315 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 MENTQ9BUN1 341 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 SGPP1Q9BX95 441 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 SAR1AQ9NR31 198 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 PCOLCE2Q9UKZ9 415 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 TDRKHQ9Y2W6 561 aaKnown RBP20.18■□□□□ 0.82
PNKP-203ENST00000593946 PTGDR2Q9Y5Y4 395 aa20.18■□□□□ 0.82
PNKP-203ENST00000593946 A0A1W2PR77 199 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 MEI4A8MW99 385 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 E7ENX8 843 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 DCXO43602 365 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 CLDN9O95484 217 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 TNFP01375 233 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 TBPL1P62380 186 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 RACK1P63244 317 aaKnown RBP20.17■□□□□ 0.82
PNKP-203ENST00000593946 TAP2Q03519 686 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 PRKG2Q13237 762 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 ARHGAP19Q14CB8 494 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 GGTA1PQ4G0N0 100 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 IQCHQ86VS3 1027 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 RGL4Q8IZJ4 473 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 ACTR8Q9H981 624 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 ARMCX1Q9P291 453 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 TRIM33Q9UPN9 1127 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 BTRCQ9Y297 605 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 RNF11Q9Y3C5 154 aa20.17■□□□□ 0.82
PNKP-203ENST00000593946 OR52A4PA6NMU1 304 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 MAP3K13O43283 966 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 PRAMEF4O60810 478 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 WNT1P04628 370 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 TDGF1P13385 188 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 MAOBP27338 520 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 CD38P28907 300 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 ACTR1BP42025 376 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 ACTR1AP61163 376 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 PCDH1Q08174 1060 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 BNIP1Q12981 228 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 RPE65Q16518 533 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 XKR7Q5GH72 579 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 TCHHL1Q5QJ38 904 aaPredicted RBP20.16■□□□□ 0.82
PNKP-203ENST00000593946 PRAMEF9Q5VWM5 478 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 NXNQ6DKJ4 435 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 CAPN13Q6MZZ7 669 aaPredicted RBP20.16■□□□□ 0.82
PNKP-203ENST00000593946 TSSK4Q6SA08 328 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 LARP4Q71RC2 724 aaKnown RBP eCLIP20.16■□□□□ 0.82
PNKP-203ENST00000593946 NRROSQ86YC3 692 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 DDIASQ8IXT1 998 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 L3MBTL4Q8NA19 623 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 C1orf216Q8TAB5 229 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 FERD3LQ96RJ6 166 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 CCT7Q99832 543 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 SLC29A3Q9BZD2 475 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 MVB12BQ9H7P6 319 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 IMP3Q9NV31 184 aaKnown RBP20.16■□□□□ 0.82
PNKP-203ENST00000593946 SCHIP1Q9P0W5 487 aaPredicted RBP20.16■□□□□ 0.82
PNKP-203ENST00000593946 KLF15Q9UIH9 416 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 PLAGL1Q9UM63 463 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 A6NCN8 305 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 CAPN14A8MX76 684 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms