RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CUL1Q13616 776 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 SF1Q15637 639 aaKnown RBP9.74□□□□□ -0.85
BRCA1-227ENST00000591849 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.74□□□□□ -0.85
BRCA1-227ENST00000591849 TEDDM1Q5T9Z0 273 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 DUPD1Q68J44 220 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 LRRC8EQ6NSJ5 796 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 ZNF549Q6P9A3 640 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 CTAGE6Q86UF2 777 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 CTAGE4Q8IX94 777 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 GPR135Q8IZ08 494 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 GALNT6Q8NCL4 622 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 OR9A1PQ8NGU1 263 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 OR2L8Q8NGY9 312 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 CDKL2Q92772 493 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 TCTN2Q96GX1 697 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 CRELD1Q96HD1 420 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 FCRL4Q96PJ5 515 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 PRORYQ9H606 182 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 GPN2Q9H9Y4 310 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-227ENST00000591849 SYTL2Q9HCH5 934 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 NSMCE4AQ9NXX6 385 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 SPHK1Q9NYA1 384 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 SEMA5BQ9P283 1151 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 PILRAQ9UKJ1 303 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 BTRCQ9Y297 605 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 ZNF106Q9H2Y7 1883 aaKnown RBP9.74□□□□□ -0.85
BRCA1-227ENST00000591849 KALRNO60229 2985 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 TMEM150CB9EJG8 249 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 K7ENP7 123 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 KATNA1O75449 491 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 SCRG1O75711 98 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 NTRK1P04629 796 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 KLK3P07288 261 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-227ENST00000591849 TPBGLP0DKB5 382 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 MPC1LP0DKB6 136 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 OAS2P29728 719 aaKnown RBP9.73□□□□□ -0.85
BRCA1-227ENST00000591849 RPA3P35244 121 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-227ENST00000591849 HSD17B2P37059 387 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 CLCN7P51798 805 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 SLC12A2P55011 1212 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 ABHD18Q0P651 414 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 FASTKD3Q14CZ7 662 aaKnown RBP9.73□□□□□ -0.85
BRCA1-227ENST00000591849 SLC5A12Q1EHB4 618 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 SOWAHCQ53LP3 525 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-227ENST00000591849 TAF1BQ53T94 588 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-227ENST00000591849 STEAP4Q687X5 459 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 PWWP2BQ6NUJ5 590 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 TRMT10BQ6PF06 316 aaKnown RBP9.73□□□□□ -0.85
BRCA1-227ENST00000591849 INO80CQ6PI98 192 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-227ENST00000591849 NEK10Q6ZWH5 1172 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 ZNF572Q7Z3I7 529 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-227ENST00000591849 STRA8Q7Z7C7 330 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 DTX1Q86Y01 620 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 CPNE9Q8IYJ1 553 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 MYO1HQ8N1T3 1032 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 C19orf47Q8N9M1 422 aaKnown RBP9.73□□□□□ -0.85
BRCA1-227ENST00000591849 LMNTD1Q8N9Z9 388 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 MCOLN3Q8TDD5 553 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 CLIP3Q96DZ5 547 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 OR2A14Q96R47 310 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 SLC30A3Q99726 388 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 LRRC1Q9BTT6 524 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 ABCF3Q9NUQ8 709 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 SPATA7Q9P0W8 599 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 PADI1Q9ULC6 663 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 CORO1CQ9ULV4 474 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-227ENST00000591849 VWA7Q9Y334 891 aa9.73□□□□□ -0.85
BRCA1-227ENST00000591849 TMEM184BQ9Y519 407 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-227ENST00000591849 COL6A6A6NMZ7 2263 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 TEX51A0A1B0GUA7 166 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 E7EQ34 232 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 E7ESA3 106 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 EFSO43281 561 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 CPNE3O75131 537 aaKnown RBP9.72□□□□□ -0.85
BRCA1-227ENST00000591849 MATN4O95460 622 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 GSTA2P09210 222 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 HIST1H2AGP0C0S8 130 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-227ENST00000591849 ZNF28P17035 718 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 HIST1H2ADP20671 130 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 CMPK1P30085 196 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 ITGA1P56199 1179 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 IL2P60568 153 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 MC1RQ01726 317 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 RHDQ02161 417 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 GUCY2DQ02846 1103 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 ILF2Q12905 390 aaKnown RBP9.72□□□□□ -0.85
BRCA1-227ENST00000591849 SRSF6Q13247 344 aaKnown RBP9.72□□□□□ -0.85
BRCA1-227ENST00000591849 MAP7Q14244 749 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 FRG1Q14331 258 aaKnown RBP9.72□□□□□ -0.85
BRCA1-227ENST00000591849 GBX1Q14549 363 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 CCSMST1Q4G0I0 132 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 THEMIS2Q5TEJ8 643 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 HECTD2Q5U5R9 776 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 FAM45BPQ6NSW5 357 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 FIGLAQ6QHK4 219 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 PAQR3Q6TCH7 311 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 CEP128Q6ZU80 1094 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 C3orf62Q6ZUJ4 267 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 UBE2R2Q712K3 238 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-227ENST00000591849 TIPARPQ7Z3E1 657 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms