RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 GSAPA4D1B5 854 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 SLC9B1P1A6NJY1 282 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 ELOA3DA6NLF2 546 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-226ENST00000591534 ENO4A6NNW6 628 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 E7EQ34 232 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 PEX12O00623 359 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 KDM1AO60341 852 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 CEACAM4O75871 244 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 SRP72O76094 671 aaKnown RBP9.15□□□□□ -0.94
BRCA1-226ENST00000591534 IPO13O94829 963 aaKnown RBP9.15□□□□□ -0.94
BRCA1-226ENST00000591534 SORBS2O94875 1100 aaKnown RBP9.15□□□□□ -0.94
BRCA1-226ENST00000591534 GSTM1P09488 218 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 VSIG8P0DPA2 414 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 POLR2CP19387 275 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-226ENST00000591534 HADHAP40939 763 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 UQCRFS1P47985 274 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 FNTAP49354 379 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 RPS18P62269 152 aaKnown RBP9.15□□□□□ -0.94
BRCA1-226ENST00000591534 GSTM4Q03013 218 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 WASHC5Q12768 1159 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 GPS2Q13227 327 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 IL10RAQ13651 578 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 TAF1AQ15573 450 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-226ENST00000591534 TAZQ16635 292 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 ELOA3BQ3SY89 546 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 NADK2Q4G0N4 442 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 LYPLAL1Q5VWZ2 237 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 CPZQ66K79 652 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 KAZNQ674X7 775 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 JMJD6Q6NYC1 403 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-226ENST00000591534 AADACL2Q6P093 401 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 KDELC1Q6UW63 502 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 SPOCD1Q6ZMY3 1216 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 FAM83HQ6ZRV2 1179 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-226ENST00000591534 DET1Q7L5Y6 550 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 ZC3H18Q86VM9 953 aaKnown RBP9.15□□□□□ -0.94
BRCA1-226ENST00000591534 IQCKQ8N0W5 287 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 GLIS1Q8NBF1 620 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 CLEC1AQ8NC01 280 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 MYRIPQ8NFW9 859 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 ELOA3Q8NG57 546 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 OR4E2Q8NGC2 313 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 HM13Q8TCT9 377 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.15□□□□□ -0.94
BRCA1-226ENST00000591534 COPS8Q99627 209 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 C19orf43Q9BQ61 176 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 C10orf88Q9H8K7 445 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 GPN3Q9UHW5 284 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-226ENST00000591534 CRLS1Q9UJA2 301 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 POMT2Q9UKY4 750 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 CFAP20Q9Y6A4 193 aaKnown RBP9.15□□□□□ -0.94
BRCA1-226ENST00000591534 AP1M2Q9Y6Q5 423 aa9.15□□□□□ -0.94
BRCA1-226ENST00000591534 USP9YO00507 2555 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-226ENST00000591534 hCG_1818297A0A087WSY0 165 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 C2orf74A8MZ97 194 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 TMEM150CB9EJG8 249 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 F5H423 210 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-226ENST00000591534 ZNF185O15231 689 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 FGGP02679 453 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 POLBP06746 335 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 ITGALP20701 1170 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 STIP1P31948 543 aaKnown RBP9.14□□□□□ -0.95
BRCA1-226ENST00000591534 CD68P34810 354 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-226ENST00000591534 CHRNA4P43681 627 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 CD151P48509 253 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 KPNA2P52292 529 aaKnown RBP9.14□□□□□ -0.95
BRCA1-226ENST00000591534 ITGA1P56199 1179 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 CHAF1BQ13112 559 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 PLEKHS1Q5SXH7 462 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 VWA5B1Q5TIE3 1220 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 DRICH1Q6PGQ1 229 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-226ENST00000591534 C8orf86Q6ZUL3 223 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 VN1R5Q7Z5H4 357 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 CREG2Q8IUH2 290 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 RELL1Q8IUW5 271 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 SYTL1Q8IYJ3 562 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 ZNF567Q8N184 647 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 SPATA4Q8NEY3 305 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 FDCSPQ8NFU4 85 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 OR4K2Q8NGD2 314 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 ADAMTS17Q8TE56 1095 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 FERD3LQ96RJ6 166 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 FAM118BQ9BPY3 351 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 OSBPL8Q9BZF1 889 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 TFB2MQ9H5Q4 396 aaKnown RBP9.14□□□□□ -0.95
BRCA1-226ENST00000591534 MVB12BQ9H7P6 319 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 AKIRIN1Q9H9L7 192 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-226ENST00000591534 CASS4Q9NQ75 786 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 RRAGDQ9NQL2 400 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-226ENST00000591534 UTP11Q9Y3A2 253 aaKnown RBP9.14□□□□□ -0.95
BRCA1-226ENST00000591534 NBASA2RRP1 2371 aa9.14□□□□□ -0.95
BRCA1-226ENST00000591534 A6NL46 340 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 F8W8V4 182 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 H7C0C1 242 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 QSOX1O00391 747 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 DDX3YO15523 660 aaKnown RBP9.13□□□□□ -0.95
BRCA1-226ENST00000591534 BUD23O43709 281 aaKnown RBP9.13□□□□□ -0.95
BRCA1-226ENST00000591534 RGS9O75916 674 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-226ENST00000591534 ATP1B2P14415 290 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-226ENST00000591534 ALAS2P22557 587 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms