RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 GBP5Q96PP8 586 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 HGH1Q9BTY7 390 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 NUDT9Q9BW91 350 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 ENAMQ9NRM1 1142 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 SMARCAL1Q9NZC9 954 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 RIMKLBQ9ULI2 386 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 ASF1AQ9Y294 204 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 PADI2Q9Y2J8 665 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 ANKRD12Q6UB98 2062 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 ESPL1Q14674 2120 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 CCDC162PA2VCL2 907 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 BLACEA4D250 179 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 C9J4A7 227 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 ZNF185O15231 689 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 HCRTR1O43613 425 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 LIASO43766 372 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 KIF5CO60282 957 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 OR2B3O76000 313 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 SUN1O94901 812 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 ONECUT2O95948 504 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 IFNB1P01574 187 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 IGHEP01854 428 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 CHRM5P08912 532 aaPredicted RBP10.03□□□□□ -0.8
VPS4B-207ENST00000591519 GNLYP22749 145 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 MSNP26038 577 aaKnown RBP10.03□□□□□ -0.8
VPS4B-207ENST00000591519 SOX8P57073 446 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 ACVR1Q04771 509 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 KIR2DS3Q14952 304 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 INPP5JQ15735 1006 aaPredicted RBP10.03□□□□□ -0.8
VPS4B-207ENST00000591519 SLC5A12Q1EHB4 618 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.03□□□□□ -0.8
VPS4B-207ENST00000591519 FHL5Q5TD97 284 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 FAM69BQ5VUD6 431 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 TLDC1Q6P9B6 456 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 IGFL3Q6UXB1 125 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 MICALCLQ6ZW33 695 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 RAB43Q86YS6 212 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 RBMXL3Q8N7X1 1067 aaKnown RBP10.03□□□□□ -0.8
VPS4B-207ENST00000591519 OR13J1Q8NGT2 312 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 PROKR1Q8TCW9 393 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 ELMO1Q92556 727 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 PNPLA2Q96AD5 504 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 NACC2Q96BF6 587 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 MS4A14Q96JA4 679 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 RANBP9Q96S59 729 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 SLC7A5P2Q9GIP4 190 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 SPRTNQ9H040 489 aaPredicted RBP10.03□□□□□ -0.8
VPS4B-207ENST00000591519 KLHL25Q9H0H3 589 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 LRRC4CQ9HCJ2 640 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 SPHK1Q9NYA1 384 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 GPR83Q9NYM4 423 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 CCDC88CQ9P219 2028 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 G3BP2Q9UN86 482 aaKnown RBP10.03□□□□□ -0.8
VPS4B-207ENST00000591519 ZNF148Q9UQR1 794 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 FER1L5A0AVI2 2057 aa10.03□□□□□ -0.8
VPS4B-207ENST00000591519 PCSK5Q92824 1860 aa10.02□□□□□ -0.8
VPS4B-207ENST00000591519 ICE1Q9Y2F5 2266 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 HEATR9A2RTY3 570 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 F8W8V4 182 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 KDM1AO60341 852 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 GPC4O75487 556 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 OR56A5P0C7T3 313 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 CBSLP0DN79 551 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 ETS1P14921 441 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 ADRA1DP25100 572 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 CBSP35520 551 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 UQCRFS1P47985 274 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 TERF1P54274 439 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 DCDP81605 110 aaKnown RBP10.02□□□□□ -0.81
VPS4B-207ENST00000591519 CDH17Q12864 832 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 ATP1A4Q13733 1029 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 DNAJC21Q5F1R6 531 aaKnown RBP10.02□□□□□ -0.81
VPS4B-207ENST00000591519 SLC6A19Q695T7 634 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 HOOK3Q86VS8 718 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 C17orf53Q8N3J3 647 aaPredicted RBP10.02□□□□□ -0.81
VPS4B-207ENST00000591519 OR52K1Q8NGK4 314 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 OR2Y1Q8NGV0 311 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 PEX13Q92968 403 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 HDAC10Q969S8 669 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 PTERQ96BW5 349 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 FER1L6-AS2Q96M78 137 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 TTC1Q99614 292 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 MENTQ9BUN1 341 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 AP1M1Q9BXS5 423 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 FRMD8P1Q9BZ68 369 aaPredicted RBP10.02□□□□□ -0.81
VPS4B-207ENST00000591519 ETNK1Q9HBU6 452 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 CUEDC1Q9NWM3 386 aaPredicted RBP10.02□□□□□ -0.81
VPS4B-207ENST00000591519 PIH1D1Q9NWS0 290 aaKnown RBP10.02□□□□□ -0.81
VPS4B-207ENST00000591519 SRPK3Q9UPE1 567 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 PLCL2Q9UPR0 1127 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 CDYLQ9Y232 598 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 JRKLQ9Y4A0 524 aa10.02□□□□□ -0.81
VPS4B-207ENST00000591519 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.02□□□□□ -0.81
VPS4B-207ENST00000591519 SPTBN1Q01082 2364 aaKnown RBP10.01□□□□□ -0.81
VPS4B-207ENST00000591519 A0A0J9YY10 115 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 OR51F1A6NGY5 319 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 A6NL46 340 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 TCP11X1B4DZS4 312 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 ZSCAN9O15535 394 aaPredicted RBP10.01□□□□□ -0.81
VPS4B-207ENST00000591519 OR1I1O60431 355 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms