RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 WDR48Q8TAF3 677 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 KCTD4Q8WVF5 259 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 LCN9Q8WX39 176 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 CCDC138Q96M89 665 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 TSNARE1Q96NA8 513 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 ZNF317Q96PQ6 595 aaPredicted RBP16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 CCDC3Q9BQI4 270 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 MENTQ9BUN1 341 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 KCNK4Q9NYG8 393 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 OR6C2Q9NZP2 312 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 GMNCA6NCL1 334 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 TPBGLP0DKB5 382 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 ALDH4A1P30038 563 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 SHMT2P34897 504 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 CCT5P48643 541 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 RAB28P51157 221 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 CDKL1Q00532 357 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 TSNQ15631 228 aaKnown RBP16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 PPP1R3AQ16821 1122 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 CDKL4Q5MAI5 379 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 AMIGO1Q86WK6 493 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 PLD6Q8N2A8 252 aaKnown RBP16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 CCT8L2Q96SF2 557 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 TBC1D10AQ9BXI6 508 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 CCDC134Q9H6E4 229 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 SPATA7Q9P0W8 599 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 IKZF3Q9UKT9 509 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 OARD1Q9Y530 152 aa16.56■□□□□ 0.24
RPRD1A-209ENST00000590898 IGHV1OR21-1A0A087WYE8 117 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 PABPN1LA6NDY0 278 aaKnown RBP16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 UBXN7O94888 489 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 RBP1P09455 135 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 TFEBP19484 476 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 BDKRB1P46663 353 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 KPNA2P52292 529 aaKnown RBP16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 SLC18A1P54219 525 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 OR1D5P58170 312 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 ZNF761Q86XN6 746 aaPredicted RBP16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 LRRC34Q8IZ02 419 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 OR10G6Q8NH81 332 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 HMGCLL1Q8TB92 370 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 CKAP2Q8WWK9 683 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 PTERQ96BW5 349 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 TWSG1Q9GZX9 223 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 RAB33BQ9H082 229 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 SRMSQ9H3Y6 488 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 NPEPPSL1A6NEC2 478 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 ZNF839A8K0R7 811 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 COPEO14579 308 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 DKK1O94907 266 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 ERGP11308 486 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 CRHR1P34998 444 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 SF3A3Q12874 501 aaKnown RBP eCLIP16.55■□□□□ 0.241e-12■■□□□ 12.2
RPRD1A-209ENST00000590898 CYP2A13Q16696 494 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 PHKG1Q16816 387 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 CCSMST1Q4G0I0 132 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 GPSM1Q86YR5 675 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 OR4E2Q8NGC2 313 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 ALKBH8Q96BT7 664 aaKnown RBP16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 CHMP6Q96FZ7 201 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 FAM111AQ96PZ2 611 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 PKP4Q99569 1192 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 DPYSL5Q9BPU6 564 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 TOR4AQ9NXH8 423 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 DLL3Q9NYJ7 618 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 EPHA6Q9UF33 1036 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 ICKQ9UPZ9 632 aa16.55■□□□□ 0.24
RPRD1A-209ENST00000590898 TCP11X1B4DZS4 312 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 NDUFAB1O14561 156 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 KERAO60938 352 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 RFPL3O75679 317 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 ZWINTO95229 277 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 AMD1P17707 334 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 CD1CP29017 333 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 TGFBIQ15582 683 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 OR4D1Q15615 310 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 ANKS6Q68DC2 871 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 Q8N9G6 341 aaPredicted RBP16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 OR2L8Q8NGY9 312 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 ZNF473Q8WTR7 871 aaKnown RBP16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 ATL1Q8WXF7 558 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 AHCYL2Q96HN2 611 aaKnown RBP16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 ATOH8Q96SQ7 321 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 MRPL57Q9BQC6 102 aaKnown RBP16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 UNKQ9C0B0 810 aaKnown RBP16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 LRRN3Q9H3W5 708 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 ALG9Q9H6U8 611 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 ARL15Q9NXU5 204 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 ENTPD2Q9Y5L3 495 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 SPTBN4Q9H254 2564 aa16.54■□□□□ 0.24
RPRD1A-209ENST00000590898 WDR91A4D1P6 747 aa16.53■□□□□ 0.24
RPRD1A-209ENST00000590898 SYCE1LA8MT33 242 aa16.53■□□□□ 0.24
RPRD1A-209ENST00000590898 MATN2O00339 956 aa16.53■□□□□ 0.24
RPRD1A-209ENST00000590898 NTN3O00634 580 aaPredicted RBP16.53■□□□□ 0.24
RPRD1A-209ENST00000590898 DUX1O43812 170 aa16.53■□□□□ 0.24
RPRD1A-209ENST00000590898 GLRA3O75311 464 aa16.53■□□□□ 0.24
RPRD1A-209ENST00000590898 SNRNP200O75643 2136 aaKnown RBP16.53■□□□□ 0.24
RPRD1A-209ENST00000590898 SLC16A8O95907 504 aa16.53■□□□□ 0.24
RPRD1A-209ENST00000590898 PROS1P07225 676 aa16.53■□□□□ 0.24
RPRD1A-209ENST00000590898 DRD4P21917 467 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms