RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 HPDP32754 393 aaPredicted RBP16.13■□□□□ 0.17
GCDH-213ENST00000590627 ETV4P43268 484 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 GLRBP48167 497 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 KCNC1P48547 511 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 PPP2R2AP63151 447 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 CXADRP78310 365 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 ABRQ12979 859 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 C1orf61Q13536 156 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 CLCA4Q14CN2 919 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 TSNQ15631 228 aaKnown RBP16.13■□□□□ 0.17
GCDH-213ENST00000590627 PPP1R3AQ16821 1122 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 ISXQ2M1V0 245 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 BROXQ5VW32 411 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 C16orf46Q6P387 395 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 IYDQ6PHW0 289 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 SPDYE1Q8NFV5 336 aaPredicted RBP16.13■□□□□ 0.17
GCDH-213ENST00000590627 RDH11Q8TC12 318 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 LMX1AQ8TE12 382 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 SKA2Q8WVK7 121 aaPredicted RBP16.13■□□□□ 0.17
GCDH-213ENST00000590627 DLG3Q92796 817 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 ATOH8Q96SQ7 321 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 INSM2Q96T92 566 aaPredicted RBP16.13■□□□□ 0.17
GCDH-213ENST00000590627 UNKQ9C0B0 810 aaKnown RBP16.13■□□□□ 0.17
GCDH-213ENST00000590627 RDH14Q9HBH5 336 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 PARVBQ9HBI1 364 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 THSD1Q9NS62 852 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 SLC17A7Q9P2U7 560 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 ADAMTS6Q9UKP5 1117 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 PSMD13Q9UNM6 376 aa16.13■□□□□ 0.17
GCDH-213ENST00000590627 COL27A1Q8IZC6 1860 aaPredicted RBP16.12■□□□□ 0.17
GCDH-213ENST00000590627 OR5K4A6NMS3 321 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 SYCE1LA8MT33 242 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 ERVH48-1M5A8F1 160 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 SNX2O60749 519 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 EML2O95834 649 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 CATP04040 527 aaKnown RBP16.12■□□□□ 0.17
GCDH-213ENST00000590627 DHRS4L1P0CG22 281 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 SLC2A4P14672 509 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 HALP42357 657 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 TMPRSS3P57727 454 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 CDKL1Q00532 357 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 SEPT7Q16181 437 aaKnown RBP16.12■□□□□ 0.17
GCDH-213ENST00000590627 RPE65Q16518 533 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 CDKL4Q5MAI5 379 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 UBE2R2Q712K3 238 aaPredicted RBP16.12■□□□□ 0.17
GCDH-213ENST00000590627 WBP1Q96G27 269 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 SCYL1Q96KG9 808 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 FAM111AQ96PZ2 611 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 DPH1Q9BZG8 443 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 CNOT10Q9H9A5 744 aaKnown RBP16.12■□□□□ 0.17
GCDH-213ENST00000590627 ASCL3Q9NQ33 180 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 SCHIP1Q9P0W5 487 aaPredicted RBP16.12■□□□□ 0.17
GCDH-213ENST00000590627 XPR1Q9UBH6 696 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 TSR3Q9UJK0 312 aaKnown RBP16.12■□□□□ 0.17
GCDH-213ENST00000590627 OARD1Q9Y530 152 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 HEBP2Q9Y5Z4 205 aa16.12■□□□□ 0.17
GCDH-213ENST00000590627 ATMQ13315 3056 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 KIR2DS5A0A0G2JLQ3 304 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 A0A0G2JNG1 304 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 CPED1A4D0V7 1026 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 ARHGEF33A8MVX0 844 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 KIR2DS3K7RE56 304 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 YY2O15391 372 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 C1orf105O95561 183 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 RPN2P04844 631 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 MTHFD1P11586 935 aaKnown RBP16.11■□□□□ 0.17
GCDH-213ENST00000590627 CYP2A7P20853 494 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 RPIAP49247 311 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 AP1S2P56377 157 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 RHDQ02161 417 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 KIR2DS5Q14953 304 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 NR0B2Q15466 257 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 PHKG1Q16816 387 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 DEFB133Q30KQ1 61 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 GUSBP11Q6P575 273 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 OGFOD3Q6PK18 319 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 EFL1Q7Z2Z2 1120 aaKnown RBP16.11■□□□□ 0.17
GCDH-213ENST00000590627 GPSM1Q86YR5 675 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 TBC1D21Q8IYX1 336 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 ARFGAP2Q8N6H7 521 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 FAM46DQ8NEK8 389 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 OR5K2Q8NHB8 316 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 WDR48Q8TAF3 677 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 MAGEC3Q8TD91 643 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 MCOLN3Q8TDD5 553 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 KCNE4Q8WWG9 221 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 C12orf66Q96MD2 445 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 SELENOSQ9BQE4 189 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 TRIM54Q9BYV2 358 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 C12orf65Q9H3J6 166 aaKnown RBP16.11■□□□□ 0.17
GCDH-213ENST00000590627 MVB12BQ9H7P6 319 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 NKIRAS1Q9NYS0 192 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 MID2Q9UJV3 735 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 RNF112Q9ULX5 631 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 TMCO1Q9UM00 188 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 PDE10AQ9Y233 779 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 ASF1AQ9Y294 204 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 PCDHGA8Q9Y5G5 932 aa16.11■□□□□ 0.17
GCDH-213ENST00000590627 ZNF462Q96JM2 2506 aa16.1■□□□□ 0.17
GCDH-213ENST00000590627 MYO1CO00159 1063 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms