RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 VPS4AQ9UN37 437 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 NAV2Q8IVL1 2488 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 SYNJ2BP-COX16A0A087WUM0 186 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 NPIPB13A6NJU9 1138 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 EIF4E1BA6NMX2 242 aaKnown RBP7.67□□□□□ -1.18
ATG4D-210ENST00000588972 NPIPB5A8MRT5 1133 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.67□□□□□ -1.18
ATG4D-210ENST00000588972 NPIPB4C9JG80 1138 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 GOLGA8SH3BPF8 625 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 CES2O00748 559 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 SLC9A3R1O14745 358 aaPredicted RBP7.67□□□□□ -1.18
ATG4D-210ENST00000588972 CAPN9O14815 690 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 KAT7O95251 611 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 METTL18O95568 372 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 LSM8O95777 96 aaKnown RBP7.67□□□□□ -1.18
ATG4D-210ENST00000588972 KLKB1P03952 638 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 GYPCP04921 128 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 APODP05090 189 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 SKILP12757 684 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 CD59P13987 128 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 PORP16435 677 aaPredicted RBP7.67□□□□□ -1.18
ATG4D-210ENST00000588972 FERP16591 822 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 IGFBP2P18065 325 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 MATN1P21941 496 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 NR4A1P22736 598 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 CORO1AP31146 461 aaKnown RBP7.67□□□□□ -1.18
ATG4D-210ENST00000588972 CASP14P31944 242 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 MVDP53602 400 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 CCDC15Q0P6D6 951 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 SLC14A1Q13336 389 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 NAA25Q14CX7 972 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 ZNF124Q15973 351 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 MFSD4BQ5TF39 518 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 SFMBT2Q5VUG0 894 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 SLC36A4Q6YBV0 504 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 CCNI2Q6ZMN8 369 aaPredicted RBP7.67□□□□□ -1.18
ATG4D-210ENST00000588972 TRMT11Q7Z4G4 463 aaKnown RBP7.67□□□□□ -1.18
ATG4D-210ENST00000588972 TAC4Q86UU9 113 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 ERICH1Q86X53 443 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 DEFB106AQ8N104 65 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 SIRT6Q8N6T7 355 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 FRMD1Q8N878 549 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 SH3KBP1Q96B97 665 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 P2RY11Q96G91 374 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 CDK5RAP1Q96SZ6 601 aaKnown RBP7.67□□□□□ -1.18
ATG4D-210ENST00000588972 AGPAT1Q99943 283 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 C11orf70Q9BRQ4 267 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 SYT11Q9BT88 431 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 CINPQ9BW66 212 aaPredicted RBP7.67□□□□□ -1.18
ATG4D-210ENST00000588972 MUC13Q9H3R2 512 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 HAUS4Q9H6D7 363 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 POPDC2Q9HBU9 364 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 KLC4Q9NSK0 619 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 TAS2R14Q9NYV8 317 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 EHD3Q9NZN3 535 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 COX16Q9P0S2 106 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 HCN3Q9P1Z3 774 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 LSM7Q9UK45 103 aaKnown RBP7.67□□□□□ -1.18
ATG4D-210ENST00000588972 MYO6Q9UM54 1294 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 CEP192Q8TEP8 1941 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 ZNF462Q96JM2 2506 aa7.67□□□□□ -1.18
ATG4D-210ENST00000588972 ASXL3Q9C0F0 2248 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 SYNDIG1LA6NDD5 238 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 ANTXRLA6NF34 631 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 TMCO5BA8MYB1 307 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 PRAMEF2O60811 474 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 DAB1O75553 588 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 TPM3P06753 285 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 PLEKP08567 350 aaPredicted RBP7.66□□□□□ -1.18
ATG4D-210ENST00000588972 UNGP13051 313 aaPredicted RBP7.66□□□□□ -1.18
ATG4D-210ENST00000588972 ACRV1P26436 265 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 NSFP46459 744 aaKnown RBP7.66□□□□□ -1.18
ATG4D-210ENST00000588972 GABRB2P47870 512 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 DIO1P49895 249 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 YWHAZP63104 245 aaKnown RBP7.66□□□□□ -1.18
ATG4D-210ENST00000588972 COG7P83436 770 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 PSG6Q00889 435 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 KDSRQ06136 332 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 TP53BP2Q13625 1128 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 TRIP6Q15654 476 aaKnown RBP7.66□□□□□ -1.18
ATG4D-210ENST00000588972 HS1BP3Q53T59 392 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 DCAF6Q58WW2 860 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 LY6G5CQ5SRR4 150 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 OTUD1Q5VV17 481 aaPredicted RBP7.66□□□□□ -1.18
ATG4D-210ENST00000588972 RHBDF2Q6PJF5 856 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 KLHL24Q6TFL4 600 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 TPGS1Q6ZTW0 290 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 Q6ZWC4 215 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 ZNF571Q7Z3V5 609 aaPredicted RBP7.66□□□□□ -1.18
ATG4D-210ENST00000588972 TMEM25Q86YD3 366 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 VSTM4Q8IW00 320 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 NAXDQ8IW45 347 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 SFTPA1Q8IWL2 248 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 KCNJ9Q92806 393 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 RFKQ969G6 155 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 ADOQ96SZ5 270 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.66□□□□□ -1.18
ATG4D-210ENST00000588972 SPHK2Q9NRA0 654 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 PCDHB16Q9NRJ7 776 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 ABHD10Q9NUJ1 306 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms