RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 OR1I1O60431 355 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 OR56A5P0C7T3 313 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 PIM1P11309 404 aaPredicted RBP13.89□□□□□ -0.19
SDF2-202ENST00000585428 MAGP20916 626 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 MSNP26038 577 aaKnown RBP13.89□□□□□ -0.19
SDF2-202ENST00000585428 CCR7P32248 378 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 FOXN2P32314 431 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 GRB7Q14451 532 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 SPA17Q15506 151 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 NKG7Q16617 165 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 HIF1AQ16665 826 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 DNAJC21Q5F1R6 531 aaKnown RBP13.89□□□□□ -0.19
SDF2-202ENST00000585428 AGAP7PQ5VUJ5 663 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 TTLL10Q6ZVT0 673 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 FAM71DQ8N9W8 422 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 DNAJB14Q8TBM8 379 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 COG1Q8WTW3 980 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 DLG3Q92796 817 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 ZNF285Q96NJ3 590 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 AGAP4Q96P64 663 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 SPSB2Q99619 263 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 PIH1D1Q9NWS0 290 aaKnown RBP13.89□□□□□ -0.19
SDF2-202ENST00000585428 NOVA2Q9UNW9 492 aaKnown RBP13.89□□□□□ -0.19
SDF2-202ENST00000585428 HS3ST3B1Q9Y662 390 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 CACNA1DQ01668 2161 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 HIVEP3Q5T1R4 2406 aa13.89□□□□□ -0.19
SDF2-202ENST00000585428 DOPEY1Q5JWR5 2465 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 MYO9AB2RTY4 2548 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 A0A1B0GX78 115 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 MACROD2A1Z1Q3 448 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 CCDC78A2IDD5 438 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 CCDC162PA2VCL2 907 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 VSTM2BA6NLU5 285 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 PSMD3O43242 534 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 LRRTM2O43300 516 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 PRICKLE3O43900 615 aaPredicted RBP13.88□□□□□ -0.19
SDF2-202ENST00000585428 KDM1AO60341 852 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 GPC4O75487 556 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 CD9P21926 228 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 ITGA3P26006 1051 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 PKLRP30613 574 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 GRIA3P42263 894 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 TSFMP43897 325 aaKnown RBP13.88□□□□□ -0.19
SDF2-202ENST00000585428 RAB28P51157 221 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 YOD1Q5VVQ6 348 aaPredicted RBP13.88□□□□□ -0.19
SDF2-202ENST00000585428 FCRL6Q6DN72 434 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 ARHGEF18Q6ZSZ5 1173 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 COX15Q7KZN9 410 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 VRK3Q8IV63 474 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 SLC22A15Q8IZD6 547 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 OR13J1Q8NGT2 312 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 GRHL3Q8TE85 626 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 FAR1Q8WVX9 515 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 SLC22A18Q96BI1 424 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 ALS2CR12Q96Q35 445 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 CDC23Q9UJX2 597 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 CENPEQ02224 2701 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 LRBAP50851 2863 aa13.88□□□□□ -0.19
SDF2-202ENST00000585428 FITM1A5D6W6 292 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 BTNL10A8MVZ5 291 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 E2F3O00716 465 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 DSCR3O14972 297 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 ALOX12BO75342 701 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 CETN2P41208 172 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 GDF10P55107 478 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 Q0VFX4 171 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 CCDC38Q502W7 563 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 ZC3H12BQ5HYM0 836 aaKnown RBP13.87□□□□□ -0.19
SDF2-202ENST00000585428 FIGLAQ6QHK4 219 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 PARP9Q8IXQ6 854 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 LRRC57Q8N9N7 239 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 LMNTD1Q8N9Z9 388 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.87□□□□□ -0.19
SDF2-202ENST00000585428 HDAC10Q969S8 669 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 ZUFSPQ96AP4 578 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 LMF1Q96S06 567 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 CARD6Q9BX69 1037 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 LHPPQ9H008 270 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 MRM3Q9HC36 420 aaKnown RBP13.87□□□□□ -0.19
SDF2-202ENST00000585428 CUTCQ9NTM9 273 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 IRAK4Q9NWZ3 460 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 IL1RAPL1Q9NZN1 696 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 IMPACTQ9P2X3 320 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 RIMKLBQ9ULI2 386 aa13.87□□□□□ -0.19
SDF2-202ENST00000585428 EPN1Q9Y6I3 576 aaPredicted RBP13.87□□□□□ -0.19
SDF2-202ENST00000585428 TARM1B6A8C7 271 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 SRPX2O60687 465 aaPredicted RBP13.86□□□□□ -0.19
SDF2-202ENST00000585428 SLCO2B1O94956 709 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 S1PR4O95977 384 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 EDN3P14138 238 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 ACVR1Q04771 509 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 HSPA14Q0VDF9 509 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 KLF1Q13351 362 aaPredicted RBP13.86□□□□□ -0.19
SDF2-202ENST00000585428 GRM7Q14831 915 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 ZNF169Q14929 603 aaPredicted RBP13.86□□□□□ -0.19
SDF2-202ENST00000585428 ZRSR2Q15696 482 aaKnown RBP13.86□□□□□ -0.19
SDF2-202ENST00000585428 FAM214AQ32MH5 1076 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 SYTL3Q4VX76 610 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 TCTE1Q5JU00 501 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 B3GNTL1Q67FW5 361 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms