RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.66■□□□□ 0.1
SS18-226ENST00000585241 ATG14Q6ZNE5 492 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 SLC9B2Q86UD5 537 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 LSMEM2Q8N112 164 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 GPR156Q8NFN8 814 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 OR52E1Q8NGJ3 308 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 SAP25Q8TEE9 199 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 PATE1Q8WXA2 126 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 C7orf26Q96N11 449 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 SORT1Q99523 831 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 SGPP1Q9BX95 441 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 PITPNM3Q9BZ71 974 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 ARRDC1-AS1Q9H2J1 176 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 SLC32A1Q9H598 525 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 UCK1Q9HA47 277 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 ZBTB26Q9HCK0 441 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 SLC40A1Q9NP59 571 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 FSCN3Q9NQT6 498 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 THAP1Q9NVV9 213 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 DOLKQ9UPQ8 538 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 TDRKHQ9Y2W6 561 aaKnown RBP15.66■□□□□ 0.1
SS18-226ENST00000585241 PRAMEF33A0A0G2JMD5 474 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 TCP11X1B4DZS4 312 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 E7ENX8 843 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 K7EPI3 171 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 SUPT7LO94864 414 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 VIPP01282 170 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 SLC1A6P48664 564 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 PIK3CGP48736 1102 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 CCT8P50990 548 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 TAP2Q03519 686 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 CLCQ05315 142 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 PCDH1Q08174 1060 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 FBXO48Q5FWF7 155 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 CFAP157Q5JU67 520 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 SFTPA2Q8IWL1 248 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 CCNYL1Q8N7R7 359 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 OR2L8Q8NGY9 312 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 MAPK15Q8TD08 544 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 ESAMQ96AP7 390 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 MOCOSQ96EN8 888 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 NSUN5Q96P11 429 aaKnown RBP15.65■□□□□ 0.1
SS18-226ENST00000585241 IL17FQ96PD4 163 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 NUSAP1Q9BXS6 441 aaKnown RBP15.65■□□□□ 0.1
SS18-226ENST00000585241 C20orf27Q9GZN8 174 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 IRF2BPLQ9H1B7 796 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 KCNH6Q9H252 994 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 GAREM1Q9H706 876 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 OPTCQ9UBM4 332 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 LNPEPQ9UIQ6 1025 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 ICKQ9UPZ9 632 aa15.65■□□□□ 0.1
SS18-226ENST00000585241 ARID1BQ8NFD5 2236 aaPredicted RBP15.64■□□□□ 0.09
SS18-226ENST00000585241 FAM221BA6H8Z2 402 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 B4DGG1 531 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 KHNYNO15037 678 aaKnown RBP15.64■□□□□ 0.09
SS18-226ENST00000585241 ITM2AO43736 263 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 PCDHGA12O60330 932 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 EDF1O60869 148 aaKnown RBP15.64■□□□□ 0.09
SS18-226ENST00000585241 MLYCDO95822 493 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 ZNF883P0CG24 379 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 CCND1P24385 295 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 SHMT2P34897 504 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 GDF5P43026 501 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 TBPL1P62380 186 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 LCP2Q13094 533 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 NAE1Q13564 534 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 GTF2H2Q13888 395 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 KRT33BQ14525 404 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 DEFB133Q30KQ1 61 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 ARL13AQ5H913 290 aaPredicted RBP15.64■□□□□ 0.09
SS18-226ENST00000585241 GTF2H2CQ6P1K8 395 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 GOLGA7Q7Z5G4 137 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 TRIM48Q8IWZ4 208 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 SYTL1Q8IYJ3 562 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 RAB42Q8N4Z0 105 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 LINC01555Q8NAE3 123 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 CHMP6Q96FZ7 201 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 ZNF382Q96SR6 550 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 ATG10Q9H0Y0 220 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 IL21RQ9HBE5 538 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 SLCO1B3Q9NPD5 702 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 NLGN3Q9NZ94 848 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 CIDEBQ9UHD4 219 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 PLAGL1Q9UM63 463 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 STK38LQ9Y2H1 464 aa15.64■□□□□ 0.09
SS18-226ENST00000585241 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.64■□□□□ 0.09
SS18-226ENST00000585241 TRBV23OR9-2A0A075B6M9 112 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 A0A1W2PPV9 198 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 CCNT2O60583 730 aaKnown RBP15.63■□□□□ 0.09
SS18-226ENST00000585241 LYPLA1O75608 230 aaPredicted RBP15.63■□□□□ 0.09
SS18-226ENST00000585241 CHRNGP07510 517 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 EPORP19235 508 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 CCR10P46092 362 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 CDH13P55290 713 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 HHEXQ03014 270 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 E2F2Q14209 437 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 FASTKQ14296 549 aaKnown RBP15.63■□□□□ 0.09
SS18-226ENST00000585241 GPR18Q14330 331 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 C14orf28Q4W4Y0 310 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 CAPN13Q6MZZ7 669 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms