RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 GRHL1Q9NZI5 618 aa15.16■□□□□ 0.02
SKA2-209ENST00000583976 IL1RAPL1Q9NZN1 696 aa15.16■□□□□ 0.02
SKA2-209ENST00000583976 VPS4AQ9UN37 437 aa15.16■□□□□ 0.02
SKA2-209ENST00000583976 SNX7Q9UNH6 387 aa15.16■□□□□ 0.02
SKA2-209ENST00000583976 PCDHGA9Q9Y5G4 932 aaKnown RBP15.16■□□□□ 0.02
SKA2-209ENST00000583976 HIVEP3Q5T1R4 2406 aa15.16■□□□□ 0.02
SKA2-209ENST00000583976 FAM237BA0A1B0GVD1 139 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 A6NL46 340 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 AGAP14A8MT82 685 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 BTN3A3O00478 584 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 NDC80O14777 642 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 FOXN2P32314 431 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 PREPP48147 710 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 PLTPP55058 493 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 ARL4CP56559 192 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 FOXL2P58012 376 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 MRPL49Q13405 166 aaKnown RBP15.15■□□□□ 0.02
SKA2-209ENST00000583976 ATP1A4Q13733 1029 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 HIF1AQ16665 826 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 DEFB110Q30KQ9 67 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 ANKRD20A4Q4UJ75 823 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 FASTKD1Q53R41 847 aaKnown RBP15.15■□□□□ 0.02
SKA2-209ENST00000583976 TMTC4Q5T4D3 741 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 LDB1Q86U70 411 aaPredicted RBP15.15■□□□□ 0.02
SKA2-209ENST00000583976 TRIM73Q86UV7 250 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 BPHLQ86WA6 291 aaPredicted RBP15.15■□□□□ 0.02
SKA2-209ENST00000583976 GALNT11Q8NCW6 608 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 LRRN4CLQ8ND94 238 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 SEC14L1Q92503 715 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 CLIP3Q96DZ5 547 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 DCUN1D1Q96GG9 259 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 LINC00615Q96LM1 132 aaPredicted RBP15.15■□□□□ 0.02
SKA2-209ENST00000583976 COPS8Q99627 209 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 XKR8Q9H6D3 395 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 FANCEQ9HB96 536 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 LRRC4CQ9HCJ2 640 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 ZDHHC3Q9NYG2 299 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 TCFL5Q9UL49 500 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 ACSL5Q9ULC5 683 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 MAP4K5Q9Y4K4 846 aa15.15■□□□□ 0.02
SKA2-209ENST00000583976 TRBV5-4A0A0C4DH59 114 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 A1L4Q6 167 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 CEACAM4O75871 244 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 PAMP19021 973 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 ACRV1P26436 265 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 ARNTP27540 789 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 ELK3P41970 407 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 PDIA2Q13087 525 aaKnown RBP15.14■□□□□ 0.01
SKA2-209ENST00000583976 PRKAA1Q13131 559 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 KRT33BQ14525 404 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 SEMA3AQ14563 771 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 NCF4Q15080 339 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 DBN1Q16643 649 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 ZNF658BQ4V348 819 aaPredicted RBP15.14■□□□□ 0.01
SKA2-209ENST00000583976 C4orf17Q53FE4 359 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 SLC6A19Q695T7 634 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 ANKMY2Q8IV38 441 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 IGDCC3Q8IVU1 814 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 TMEM151BQ8IW70 566 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 ZBTB2Q8N680 514 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 OTUD6BQ8N6M0 293 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 ACVR1CQ8NER5 493 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 OR52E1Q8NGJ3 308 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 LCN9Q8WX39 176 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.14■□□□□ 0.012e-9■■■■■ 43.2
SKA2-209ENST00000583976 LRFN5Q96NI6 719 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 EBNA1BP2Q99848 306 aaKnown RBP15.14■□□□□ 0.01
SKA2-209ENST00000583976 PITPNM3Q9BZ71 974 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 OR52A5Q9H2C5 316 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 SRMSQ9H3Y6 488 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 ACTR5Q9H9F9 607 aaPredicted RBP15.14■□□□□ 0.01
SKA2-209ENST00000583976 CATSPERZQ9NTU4 200 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 MARCH4Q9P2E8 410 aaPredicted RBP15.14■□□□□ 0.01
SKA2-209ENST00000583976 PLEKHB1Q9UF11 243 aaPredicted RBP15.14■□□□□ 0.01
SKA2-209ENST00000583976 DMGDHQ9UI17 866 aaKnown RBP15.14■□□□□ 0.01
SKA2-209ENST00000583976 CHMP2BQ9UQN3 213 aa15.14■□□□□ 0.01
SKA2-209ENST00000583976 SNRNP200O75643 2136 aaKnown RBP15.13■□□□□ 0.01
SKA2-209ENST00000583976 ESPL1Q14674 2120 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 CD3EAPO15446 510 aaKnown RBP15.13■□□□□ 0.01
SKA2-209ENST00000583976 HCRTR1O43613 425 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 CTSBP07858 339 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 RALBP11234 206 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 PGAM1P18669 254 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 CYP2A7P20853 494 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 NDUFS1P28331 727 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 PDHA2P29803 388 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 FHL5Q5TD97 284 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 KIAA0930Q6ICG6 404 aaPredicted RBP15.13■□□□□ 0.01
SKA2-209ENST00000583976 JMJD6Q6NYC1 403 aaPredicted RBP15.13■□□□□ 0.01
SKA2-209ENST00000583976 CDHR3Q6ZTQ4 885 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 CARFQ8N187 725 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 RBMXL3Q8N7X1 1067 aaKnown RBP15.13■□□□□ 0.01
SKA2-209ENST00000583976 OR8K5Q8NH50 307 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 FBXO25Q8TCJ0 367 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 CFAP36Q96G28 342 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 FERD3LQ96RJ6 166 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 NLNQ9BYT8 704 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 L2HGDHQ9H9P8 463 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 C1GALT1Q9NS00 363 aa15.13■□□□□ 0.01
SKA2-209ENST00000583976 PIKFYVEQ9Y2I7 2098 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms